Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1206 ATGAGTACGTCAAACTCAAAAGTGAACTTCATTGCAAGTAGTTCTGGAGTTGTAATAGAAAACATAGCTCCATTGAAAACCGTGTCCGGTCCTACAACAAATTTACCGGGGGATGAAGACATTCAACCACTTTCAGGATGCCCATTCTATCATGTGATTATTTCAAAATCACATATTTATCCTGCTTTTAGCATGCCGGTTTCAAACGAATTAGCACTTCCTTCAGCTGTAGTCCCAGCTATTCTCAAGTATGGAAGCAAGAGCTGGGACATACAGTATTGCGGACTAGGCAAAAGTTACAACAAGTTCTTTAACCACAGAGGCTGGAAAAAATTTGCTGTTGATAATCATTTGGAGGTTGGGGACGCTTGCGTCTTTGAACTCAAGGAGTCGAGTGAAGAGAAACTTGTCTTCCAAGTTCAAATTCTTAGAGGTGACCTCCCTGAAACTTTTCTTAAAAGGAAAGAAAAAGAGAAGGAAAAGAAAAAGGCCAGGGCCAAGATTGCAGAAAAGCCAGGAGGTAAAAGTGCAGAAAACCGCAACAGTGCAGAAATGCCAATTCTCATTGACTAG 573 0.4101 MSTSNSKVNFIASSSGVVIENIAPLKTVSGPTTNLPGDEDIQPLSGCPFYHVIISKSHIYPAFSMPVSNELALPSAVVPAILKYGSKSWDIQYCGLGKSYNKFFNHRGWKKFAVDNHLEVGDACVFELKESSEEKLVFQVQILRGDLPETFLKRKEKEKEKKKARAKIAEKPGGKSAENRNSAEMPILID* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1206 190 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 30 158 IPR044837 -
Ahy4g1206 190 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 30 158 - -
Ahy4g1206 190 Pfam B3 DNA binding domain 85 140 IPR003340 GO:0003677
Ahy4g1206 190 SUPERFAMILY DNA-binding pseudobarrel domain 46 144 IPR015300 -
Ahy4g1206 190 Gene3D - 39 146 IPR015300 -
Ahy4g1206 190 MobiDBLite consensus disorder prediction 154 190 - -
Ahy4g1206 190 MobiDBLite consensus disorder prediction 154 174 - -
Ahy4g1206 190 SMART B3_2 50 146 IPR003340 GO:0003677
Ahy4g1206 190 ProSiteProfiles B3 DNA-binding domain profile. 86 146 IPR003340 GO:0003677
Ahy4g1206 190 CDD B3_DNA 87 144 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1206 Ahy-Chr4 33815451 33817674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1206 53 149 REM Transcription Factor Family AT4G33280 30.928 9.99e-07 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy4g1206 B3 4.00E-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1206 - - adu:107484003 363.229