Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0509 ATGGGAAATGTGAATGAGAGAGAAGAGATGAATGGAACTCACACAGGTGCAGAAGAAGAAGAGCAAGAAGGTGCTGAGAGTGTTGTGAGTGATGGAGCTGCCAACCTTCCCCCTTCTGAGTTAATGGGTCACTCCCCACCTGCTAGCCCTAGAGCCACCCATTCTCCATTGATGTTCACTCCTCAAGTCCCGGTGGTTCCACTTCAAAGACCTGATGAGATGCAAGTTCCAAGTCCTTCCTGGATGCAAACTACTTCAGGGTATGAAGATGTGGACAGTGAACTTGGTATTCCAACAATGATTACTTGGATTTATGATGGCAAAGAAGTAGCTGTGGAGGGATCATGGGATAATTGGAAAACAAGAATGCCTTTGCAGAGATCGGGAAAGGACTTCACAATTATGAAGGTACTACCTTCCGGTGTTTATCAATTCAGATTTATTGTGGATGGACAGTGGAGGTATGCACCTGACTTGCCTTGGGCTCAAGATGATGCTGGGATTACTTACAATGTTTTAGACTTACAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTGGTTTTGAACCTCCTAAATCACCAGACTCTAGTTATAACAACTTACAACTTAGTTCCGAAGATTACGCGAAGGAACCGCCATTGGTTCCTCCATTCTTGCAAATGACACTTCTTAATGTTCCTTCAACAAATATGGAAATCCAACCTCCTATATCAAGACCTCAGCATGTAGTGCTCAATCATCTGTACATGCAGAAAGGAAAGGGCAGCCCTTCAGTAGTTGCGCTCGGTACAACTCATCGGTTTCTCGCCAAATATGTCACTGTAGTGCTGTACAAGTCTTTGCAGAGGTAG 855 0.4421 MGNVNEREEMNGTHTGAEEEEQEGAESVVSDGAANLPPSELMGHSPPASPRATHSPLMFTPQVPVVPLQRPDEMQVPSPSWMQTTSGYEDVDSELGIPTMITWIYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWAQDDAGITYNVLDLQDYVPEDIGSISGFEPPKSPDSSYNNLQLSSEDYAKEPPLVPPFLQMTLLNVPSTNMEIQPPISRPQHVVLNHLYMQKGKGSPSVVALGTTHRFLAKYVTVVLYKSLQR* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0509 284 Pfam Glycogen recognition site of AMP-activated protein kinase 97 176 IPR032640 -
Ahy4g0509 284 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 210 280 IPR006828 GO:0005515
Ahy4g0509 284 MobiDBLite consensus disorder prediction 1 53 - -
Ahy4g0509 284 CDD E_set_AMPKbeta_like_N 98 174 - -
Ahy4g0509 284 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 284 - -
Ahy4g0509 284 SUPERFAMILY AMPKBI-like 179 281 IPR037256 -
Ahy4g0509 284 Gene3D - 187 282 - -
Ahy4g0509 284 Gene3D Immunoglobulins 91 179 IPR013783 -
Ahy4g0509 284 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 284 IPR043554 -
Ahy4g0509 284 SUPERFAMILY E set domains 97 182 IPR014756 -
Ahy4g0509 284 SMART AMPKBI_2 192 282 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0509 Ahy-Chr4 6584947 6588273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0509 K07199 - gmx:100777497 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0582 14 8042884 8046222 Ahy4g0509 4 6584947 6588273 hybridization
Ahy11g2263 11 136063252 136066168 Ahy4g0509 4 6584947 6588273 PCT
Ahy1g2594 1 104615753 104618661 Ahy4g0509 4 6584947 6588273 PCT