Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0404 ATGGACTACTACTGGACTAGAGGTCACACCCTCGGCCGGGGATCCACAGCCACCGTCTACACCGCTGAATTTCATGGGTTTGGTGAACTCTTTGCCGTGAAGTCAGCGGAGGTACACCGGTCTGAGGAGCTGCGGAAGGAACAGGGTCTTCTTTCATCGCTCAATTGTCCTCAGATTGTCAAGTACAAAGGGTACGATGTTACGTACGAGGATGGTCGGTACTTTTACAACCTCTTCTTGGAATACGCGCCAAGGGGGACCCTGCTTGACGTAATTGCCCATTACAATCACGGCGGTGCCACCATGGAACACTCATTGGCAAGTGTCTACACGCGCCAGATTCTGTTGGGACTCAACTATCTTCATTCCAATGGGATAGTACATTGCGATGTAAAAGGGCAGAACGTTCTCATCACCCAACATGGCGCCAAAATCGCCGACTTTGGTTGTGCCCGCAAAGTTGGCTCCGGCGCCGGCGGACGAGGAGGGGTTATCGCTGGAACGCCGGCGTTCATGGCGCCGGAGGTGGCGCGTGGGGATGAACAGGGATTCCCAGCTGACGTGTGGGCCCTGGGATGCACCATTCTTGAGATGGTTACCGGGAAACCGCCGTGGAAAGACGTTTCCGGCGACCCTGTTTCGGTGCTTTATCGGGTTGGATTCTCCGGCGAGGCGCCAGAGATTCCGGAATCTGTGTCGGAGGAAGTTAAGGACTTCTTGGGGAAGTGCTTGAGGAGTGAAGCGAGTAAGAGATGGACGGTGAAGGAGCTTCTGGGACACGCGTTCGTTGCGGAATCGCGTTTTGTGGGAATAGAATGTGATGAGCATGATTTGGACACACCCACAAGTGTTTTGGAACCACAAGGCCTTTGGAACTGGGACACCAATCAGGACTCGCCACGTGGCATCTCTTCAATGAATTCTCCTAGTGCTAGGGACAGAGTTCTTGGGTTGTGTGGTGATGATGAGCCTAACTGGGATCTTAATAATGCTGATGATGATAAGTGGATCACTGTGAGAAGTAATGAGGACTACTCTCCCGTTGGGATAGCTCAGGATTTTTGTTCAGACAATGTTAGGATCCTTAGAGAGGATGATGAGAATGTTTTGGTGAATTTTTATGAACCACCACAGGATGTAGTAGTAATTTGCAATGTAATTCATGAATTGAGTAGATGGAATGATGTAGTAGTTGTTGTTGGTGATTCTTACCTTTGCAGAATCATTGATTGTAAGTGTTGCATTAGAGATTCAGTGTTTTTAGGGTGTTGTTCATCATGTTCATCTCTAAACATTTATTATTATTGTTGTAAGAAGAAAGAAATTTATGTTACGCATGGTCTCCTCTTTAATTCCACTTTGGATGATATGGCTACTTTACAATTTAAATTTCCTATTCTACTTCAATGGAATAATAACGTGTTCCCAATAATGTGA 1437 0.4753 MDYYWTRGHTLGRGSTATVYTAEFHGFGELFAVKSAEVHRSEELRKEQGLLSSLNCPQIVKYKGYDVTYEDGRYFYNLFLEYAPRGTLLDVIAHYNHGGATMEHSLASVYTRQILLGLNYLHSNGIVHCDVKGQNVLITQHGAKIADFGCARKVGSGAGGRGGVIAGTPAFMAPEVARGDEQGFPADVWALGCTILEMVTGKPPWKDVSGDPVSVLYRVGFSGEAPEIPESVSEEVKDFLGKCLRSEASKRWTVKELLGHAFVAESRFVGIECDEHDLDTPTSVLEPQGLWNWDTNQDSPRGISSMNSPSARDRVLGLCGDDEPNWDLNNADDDKWITVRSNEDYSPVGIAQDFCSDNVRILREDDENVLVNFYEPPQDVVVICNVIHELSRWNDVVVVVGDSYLCRIIDCKCCIRDSVFLGCCSSCSSLNIYYYCCKKKEIYVTHGLLFNSTLDDMATLQFKFPILLQWNNNVFPIM* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0404 478 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 357 - -
Ahy4g0404 478 Pfam Protein kinase domain 6 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0404 478 Gene3D Transferase(Phosphotransferase) domain 1 2 289 - -
Ahy4g0404 478 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Ahy4g0404 478 ProSiteProfiles Protein kinase domain profile. 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0404 478 PANTHER MAP KINASE KINASE KINASE 5 357 - -
Ahy4g0404 478 SMART serkin_6 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g0404 478 CDD STKc_MAPKKK 5 263 - -
Ahy4g0404 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Ahy4g0404 478 SUPERFAMILY Protein kinase-like (PK-like) 5 301 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0404 Ahy-Chr4 5084429 5086507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0404 5 263 MAP Kinase Kinase Kinase AT2G32510 55.894 6.72e-94 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy4g0404 Pkinase 6.60E-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0404 K20716 - gmx:100802174 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0482 14 6348181 6350085 Ahy4g0404 4 5084429 5086507 hybridization