Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0347 ATGGATAAAAAAGAGAGTGATCAATCTGCAACAAGAGGGACAAGCACTCCATCACACACCAAGGTAGTAGCTGGTCCTTCTGTTCCTTCACCTCTCTTAAGAGATCATCAACATTCTCACCATTACATCCACTACCACCACCTGCAACAAGAAGAAGAATTTCACCAAAAACTTCACAACTTTTGGGACAATCAGTACCGTGAAATCGAACAAGCGGCCGATTTCAGGATCCACAGCTTACCCTTGGCTAGAATCAAGAAGATCATGAAGGCTGATGAAAATGTGAAGATGATATCAGCAGAGGCTCCTATTATATTTTCCAAGGCTTGTGAAATGTTCATCATGGAATTGACAATGAGGGCTTGGAATAATGCTGAAGAGAACAAAAGGAGAACACTTCAGAAGAATGACATTGCTGCTGCAGTCACAAAAACTGATGTGTTTGATTTTCTTGTTGATGTTGTCCCTAGAGATGAAACCGTGGACCTTGGTTTATATGCTGGTATAAGAAGAGGTGGAGGCAATAATAATATTGTTCCTTGCTACTATTATGTGCCACCTCAGCATGTTATGGGTCCACCACCATATGGTCCTCCAAGAGTGCCTATGGTGGGAAGACATGTTCCTAATCAAGATAACATTAATGAGCAGCAAAATAGTGAAAATACTACTCATGCTATGTGTCCAAAGGAGCAAAATCATTCTTCAGATTCAGATGAATGA 723 0.408 MDKKESDQSATRGTSTPSHTKVVAGPSVPSPLLRDHQHSHHYIHYHHLQQEEEFHQKLHNFWDNQYREIEQAADFRIHSLPLARIKKIMKADENVKMISAEAPIIFSKACEMFIMELTMRAWNNAEENKRRTLQKNDIAAAVTKTDVFDFLVDVVPRDETVDLGLYAGIRRGGGNNNIVPCYYYVPPQHVMGPPPYGPPRVPMVGRHVPNQDNINEQQNSENTTHAMCPKEQNHSSDSDE* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0347 240 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 24 237 - -
Ahy4g0347 240 Gene3D Histone, subunit A 41 157 IPR009072 GO:0046982
Ahy4g0347 240 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 24 237 - -
Ahy4g0347 240 MobiDBLite consensus disorder prediction 1 33 - -
Ahy4g0347 240 MobiDBLite consensus disorder prediction 210 231 - -
Ahy4g0347 240 MobiDBLite consensus disorder prediction 205 240 - -
Ahy4g0347 240 Pfam Core histone H2A/H2B/H3/H4 66 142 IPR007125 GO:0003677
Ahy4g0347 240 SUPERFAMILY Histone-fold 44 151 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0347 Ahy-Chr4 4449088 4451223 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0347 58 191 CCAAT-HAP5 Transcription Factor Family AT1G56170 64.444 3.62e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Ahy4g0347 Histone 6.20E-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0347 K08066 - fve:101311753 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0427 14 5734119 5736231 Ahy4g0347 4 4449088 4451223 hybridization