Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4083 ATGGAGAACAACAACAACAAAAGAAACCCACTTCCCCATTTTCCACGTCTTACACTCATGCTCTTCCTTATTACGATGATGTTTCCTGTGACTGAAGAAGCTGCAGCACCAGTTTCTTCTTCCATCAAGACCGATGAACAGGCCCTTCTCATGTTCAAAAAGATGGTTCAAAAAGATGAAACTGGAGCTTTGTCAGGTTGGCAGCTCAACAGGAATCCATGCACCTGGTTTGGAGTTTCATGCACTCATGGAAGAGTCACTCAGCTTGATCTCAGTGGCCATGGTTTATCCGGAACCATCACTCTTGACCCTCTATCTTCTCTAGACATGTTGTCTGTTCTGAAACTTTCTCTCAATTCATTCTCTGTAAATTCCACTTCCTTGCTTACCCTCCCTTACAGTTTGACACAGCTTGATCTCTCTTTTGCCGGAGTTTCAGGTCCAATCCCTGACAACTTCTTCTCAAAGTGTCCAAATCTTGTTGTTGTGAACCTCTCTTACAACAACATGACTGGCCCTATCCCTGATAATTTCTTGCAAAATTCTGATAAGTTGCAGTCTCTTGATCTCTCTTCCAACAATTTATCAGGCTCAATATCTGGCCTCAAAATTGATTGCAACTCCTTGTTGCAGCTTGATCTATCTGAGAACCGTTTATCAGATTCAATTCCAATCTCTTTGTCAAACTGCACCAGCCTCAAGAGTTTGAACTTGGGGAACAATTTGATTTCTGGTGAGATTCCAAAGGCTTTGGGGAATCTGAACAGCCTACAGACTTTGGATCTTTCAAGGAATCAACTCATTGGTTGGATCCCTTTTGAGTTTGGAAATGTGTGTGCTTCCCTTGTCGAACTTAGGCTCTCTTTCAACAACCTTACAGGTTCAATACCATCAAGTTTCTCTTCTTGCACTTGGCTGCAGCTTCTTGATATATCCAACAACAACATGTCAGGTCCATTGCCAGATTCAATCTTTCATAATCTCGGATCATTGCAGGAATTAAGGCTGGGAAACAATGCAATCTCAGGGCCATTCCCATCTTCAATATCTTCCTGCAAGAAACTGAGGATTGTGGATTTTAGCTCAAACAAATTCTATGGATCTATCCCCATAGATATATGTCCAGGTGCAGCATCACTTGAGGAGCTGAGAATGCCAGATAATCTCATAACTGGGGAAATTCCATCTCAACTGTCAAAATGCTCACAGTTAAAGACACTTGATTTTAGTCTCAACTATCTCAATGGTTCAATCCCTGAGGAGCTTGGACAGCTTGAGAATCTTGAGCAGCTGATAGCATGGTTCAATGGCTTGGAAGGTAAGATTCCACCAAAGTTGGGGAAATGCAAGAAGCTCAAGGATCTTATACTGAACAATAATCACTTAACTGGTGAAATTCCCAGTGAGTTGTTCAACTGCAGCAACCTTGAATGGATATCACTCACAAGCAATGAGCTCAGCGGCGAGATACCGCGCGAGTTTGGCCTATTGACAAGGCTGGCTGTTCTGCAGCTTGGAAACAACAGCTTCACCGGGCAGATACCGGGGGAGCTGGCCAATTGCAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACAGGTGAGATTCCACCAAGACTTGGAAGGCAGCAAGGAGCAAAGTCATTGTTTGGAATTTTGTCAGGAAACACTTTGGTGTTTGTGAGGAATGTTGGAAACTCGTGCAAAGGTGTTGGGGGTTTGTTGGAATTCTATGGAATAAGGCCTGAGAGACTCTTGCAGGTTCCAACACTGAGGACCTGTGATTTCACAAGGCTGTATTCAGGTCCTGTTCTTAGTCTTTTCACAAAGTATCAGACTCTGGAGTATCTTGATCTCTCCTACAACAAGCTCCGAGGAAGAATCCCCCAAGAATTCGGGGACATGGAGGCCCTGCAGGTTCTTGAGTTGTCTCACAATCAGTTATCTGGAGAAATCCCTTCAACATTAGGCCAGCTAAAGAATTTGGGAGTGTTTGATGCATCACACAATAGATTGCAGGGCCATATCCCTGACTCATTCTCAAACCTGTCATTCTTGGTGCAGATTGATCTATCAAACAATGAGTTAACAGGAGAGATTCCATCTAGAGGGCAATTGAGCACACTTCCAGCTTCTCAGTATGCAAACAATCCTGGTCTTTGTGGTGTTCCGTTGCAGGAATGCAGCAGGAATGATAACACCCAAACCACAGCAAATCAAAGTGAGGAGATTCCCAGAGGAGGCCATAGATCAGCAACTGCAGCATGGGCTAACAGCATTGTCATGGGGATTCTGATTTCTGTGGCTTCTGTTTGTATTTTGATCGTGTGGGCAATCGCGATGCGGGCGAGGAGGAAGGAGGCAGAGGAAGTGAAGATGCTTAATAGCTTGCAGGCATCACATGCTGCCACAACATGGAAGATTGACAAGGAGAAAGAGCCTCTAAGCATCAATGTTGCAACCTTTCAGAGGCAGCTTAGGAAGCTGAAATTCTCACAGCTGATCGAAGCAACCAATGGATTCTCAGCAGCAAGCCTAATTGGTTGTGGTGGCTTTGGTGAAGTGTTCAAGGCCACACTGAAGGACGGTTCAAGTGTTGCAATCAAGAAGCTGATTAGGCTGAGCTGCCAGGGTGATAGAGAATTCATGGCTGAGATGGAAACCTTGGGGAAGATCAAGCACAGAAACCTAGTCCCTCTGTTGGGATACTGCAAAGTTGGGGAAGAGAGGCTGCTTGTGTATGAGTACATGGAGTATGGAAGCCTGGAGGAGATGCTCCACGGCAGAACAAAGTCGCGGGACCGGCGAATTCTGACATGGGAAGAGAGGAAAAAGGTTGCAAGAGGTGCTGCGAAGGGACTTTGTTTCCTTCACCACAATTGCATCCCACACATAATACACAGAGACATGAAATCAAGCAATGTGCTGCTTGATCATGAAATGGAATCAAGAGTGTCTGATTTCGGAATGGCAAGGCTCATAAGTGCACTTGACACCCATCTCAGCGTCAGCACATTGGCCGGAACACCTGGCTATGTTCCACCCGAGTACTACCAAAGCTTCAGGTGCACGGCAAAGGGAGATGTCTACTCTTTTGGAGTTGTCATGCTTGAATTGTTAACCGGGAAGCGCCCCACCGATAAGGAGGACTTTGGAGACACCAATTTGGTGGGATGGGCCAAGATGAAGGTTCGCCAAGGGACTCACATGGAAGTCATTGATCCTGATTTGCTTCAGGTTTGTCAAGGTTCAGATGAAGCTCAGCTGAATGAAGTTAAGGACATGCTTCGCTTCTTGGATATCACTTTGCAGTGCGTTGATGACTTGCCTTCTAAGAGGCCAAACATGTTGCAGGTTGTTGCCATGCTCAGAGACCTTCATCATGGAACCACCAACACTGCTTGA 3411 0.4541 MENNNNKRNPLPHFPRLTLMLFLITMMFPVTEEAAAPVSSSIKTDEQALLMFKKMVQKDETGALSGWQLNRNPCTWFGVSCTHGRVTQLDLSGHGLSGTITLDPLSSLDMLSVLKLSLNSFSVNSTSLLTLPYSLTQLDLSFAGVSGPIPDNFFSKCPNLVVVNLSYNNMTGPIPDNFLQNSDKLQSLDLSSNNLSGSISGLKIDCNSLLQLDLSENRLSDSIPISLSNCTSLKSLNLGNNLISGEIPKALGNLNSLQTLDLSRNQLIGWIPFEFGNVCASLVELRLSFNNLTGSIPSSFSSCTWLQLLDISNNNMSGPLPDSIFHNLGSLQELRLGNNAISGPFPSSISSCKKLRIVDFSSNKFYGSIPIDICPGAASLEELRMPDNLITGEIPSQLSKCSQLKTLDFSLNYLNGSIPEELGQLENLEQLIAWFNGLEGKIPPKLGKCKKLKDLILNNNHLTGEIPSELFNCSNLEWISLTSNELSGEIPREFGLLTRLAVLQLGNNSFTGQIPGELANCSSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFYGIRPERLLQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNKLRGRIPQEFGDMEALQVLELSHNQLSGEIPSTLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGEIPSRGQLSTLPASQYANNPGLCGVPLQECSRNDNTQTTANQSEEIPRGGHRSATAAWANSIVMGILISVASVCILIVWAIAMRARRKEAEEVKMLNSLQASHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRTKSRDRRILTWEERKKVARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWAKMKVRQGTHMEVIDPDLLQVCQGSDEAQLNEVKDMLRFLDITLQCVDDLPSKRPNMLQVVAMLRDLHHGTTNTA* 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4083 1136 Gene3D - 555 611 - -
Ahy3g4083 1136 Pfam Protein tyrosine and serine/threonine kinase 847 1124 IPR001245 GO:0004672|GO:0006468
Ahy3g4083 1136 Gene3D Transferase(Phosphotransferase) domain 1 919 1135 - -
Ahy3g4083 1136 SUPERFAMILY L domain-like 278 728 - -
Ahy3g4083 1136 Pfam Brassinosteroid receptor island domain 552 610 IPR045381 -
Ahy3g4083 1136 Pfam Leucine rich repeat 609 650 IPR001611 GO:0005515
Ahy3g4083 1136 Pfam Leucine rich repeat 209 267 IPR001611 GO:0005515
Ahy3g4083 1136 Pfam Leucine rich repeat 135 195 IPR001611 GO:0005515
Ahy3g4083 1136 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 32 1128 - -
Ahy3g4083 1136 PRINTS Leucine-rich repeat signature 254 267 - -
Ahy3g4083 1136 PRINTS Leucine-rich repeat signature 185 198 - -
Ahy3g4083 1136 Pfam BspA type Leucine rich repeat region (6 copies) 279 390 IPR026906 -
Ahy3g4083 1136 Gene3D Ribonuclease Inhibitor 44 155 IPR032675 -
Ahy3g4083 1136 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 32 1128 - -
Ahy3g4083 1136 SUPERFAMILY L domain-like 64 370 - -
Ahy3g4083 1136 Gene3D Ribonuclease Inhibitor 156 731 IPR032675 -
Ahy3g4083 1136 ProSitePatterns Protein kinases ATP-binding region signature. 849 872 IPR017441 GO:0005524
Ahy3g4083 1136 Pfam Leucine rich repeat N-terminal domain 43 81 IPR013210 -
Ahy3g4083 1136 ProSiteProfiles Leucine-rich repeat profile. 184 206 IPR001611 GO:0005515
Ahy3g4083 1136 ProSiteProfiles Protein kinase domain profile. 843 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g4083 1136 SMART serkin_6 843 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g4083 1136 SUPERFAMILY Protein kinase-like (PK-like) 824 1125 IPR011009 -
Ahy3g4083 1136 ProSitePatterns Serine/Threonine protein kinases active-site signature. 967 979 IPR008271 GO:0004672|GO:0006468
Ahy3g4083 1136 Gene3D Phosphorylase Kinase; domain 1 802 918 - -
Ahy3g4083 1136 SMART LRR_typ_2 279 302 IPR003591 -
Ahy3g4083 1136 SMART LRR_typ_2 449 473 IPR003591 -
Ahy3g4083 1136 SMART LRR_typ_2 254 277 IPR003591 -
Ahy3g4083 1136 SMART LRR_typ_2 637 661 IPR003591 -
Ahy3g4083 1136 SMART LRR_typ_2 328 352 IPR003591 -
Ahy3g4083 1136 SMART LRR_typ_2 522 545 IPR003591 -
Ahy3g4083 1136 SMART LRR_typ_2 497 521 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4083 Ahy-Chr3 140306034 140309868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4083 45 1132 Receptor kinase-like Gene Family AT1G55610 48.983 0.0 1007
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Ahy3g4083 PK_Tyr_Ser-Thr 1.70E-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4358 13 143275123 143279090 Ahy3g4083 3 140306034 140309868 hybridization