Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4041 ATGGGCAAATCGGCTCTTTGGCTCACCACATTCACCCTCGTATTGACGGGCTTCCTGACGGCCCGGGCTCAGCCAGAGGCAAACTTCAAGTGCAGCAGCAGCACGAACGCCACGTGTCGAGCTCTAATCGACTACTTTAGCCAGAATGCGACCACGCTCCGAGACATCCAGAAGCTGTTCAACGTGAAGCACCTCCCGGACCTGTTGGGCGCAAACGCCAACACGATCCCGGAAAACGCGTCAGGCAGTTACAGCGTGGCGCCCAAGCAGGTAGTTAGGATTCCGTTTCCGTGCAAGTGCAGTAACGGAACGGGGCTGTCGAACCACGTGCCGTTGTACAAAATCAAGCCTGGTGATGGCTTGGACTACATAGCAAGGACAGTGTTCGCGGGCGTGGTGACGTACCAGCAGATCCAGAAGGCTAATAATATCTCTGACGCCAATAAGATCATCGCTGGGGATTCCATTTGGATACCGTTGCCTTGTAGCTGTGATAGTGTTGGAGGGAGCAGTGTGGTGCACTATGCTTACATAGTTCCAATTGGAAGCTCCGTGGAGGGGATTGCACAGGAGTTTGGTACCACTGAACAGATCATTCTTAGTCTCAACGGTATTGATGACCCTAAGAAGCTTCAGGCACAGCAGGTTATCGATGTCCCTCTCAAAGCTTGTTCCACAAGTGTTAACAATTCCATGGACTACCCTCTGCTGGTTTCAAACTCCACTTACGTCTACACTGCCAACGAATGCGTAAAATGCAAATGCGACTCCAGCAACAACTATGTATTGCAATGCGAGCCATCGCAGCTTAAACCAACAGGGGGAAAGTGGTCGGTATGCCCCTCCATGAAATGCACAGGGAACCTGACAATTGGCAACTTGACATCTGCTTCAGATGATCCATGCAACCGCACCTTCTGTGCCTATGCGGGTTATAGCTTCAAAAGAATCAATACCATTCTTGCTAATGAGTCCACTTGTCCTGCACCGGCACCTGCACCCAGTGGCGGTTCAGTAGGACCAGGTGGTTCAGGATCAGGAGCGTCAAGGACTACCTTCGGTCTTATCATTGTTCTCCACTTCATCCTCCTTGCTCTGTGTCTTTTGTAG 1110 0.5135 MGKSALWLTTFTLVLTGFLTARAQPEANFKCSSSTNATCRALIDYFSQNATTLRDIQKLFNVKHLPDLLGANANTIPENASGSYSVAPKQVVRIPFPCKCSNGTGLSNHVPLYKIKPGDGLDYIARTVFAGVVTYQQIQKANNISDANKIIAGDSIWIPLPCSCDSVGGSSVVHYAYIVPIGSSVEGIAQEFGTTEQIILSLNGIDDPKKLQAQQVIDVPLKACSTSVNNSMDYPLLVSNSTYVYTANECVKCKCDSSNNYVLQCEPSQLKPTGGKWSVCPSMKCTGNLTIGNLTSASDDPCNRTFCAYAGYSFKRINTILANESTCPAPAPAPSGGSVGPGGSGSGASRTTFGLIIVLHFILLALCLL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4041 369 Gene3D LysM domain 170 232 IPR036779 -
Ahy3g4041 369 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 22 328 - -
Ahy3g4041 369 CDD LysM 113 158 IPR018392 -
Ahy3g4041 369 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Ahy3g4041 369 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 22 328 - -
Ahy3g4041 369 SUPERFAMILY LysM domain 112 160 IPR036779 -
Ahy3g4041 369 CDD LysM 177 219 IPR018392 -
Ahy3g4041 369 Pfam LysM domain 177 220 IPR018392 -
Ahy3g4041 369 Pfam LysM domain 113 159 IPR018392 -
Ahy3g4041 369 SMART LysM_2 112 159 IPR018392 -
Ahy3g4041 369 SMART LysM_2 176 220 IPR018392 -
Ahy3g4041 369 ProSiteProfiles LysM domain profile. 175 219 IPR018392 -
Ahy3g4041 369 Gene3D LysM domain 112 167 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4041 Ahy-Chr3 139779936 139782574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4041 1 359 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 45.580 1.47e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4041 - - gmx:100804190 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4312 13 142721884 142724762 Ahy3g4041 3 139779936 139782574 hybridization