Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4028 ATGGTGAGGGATGATGAGAAGAGAATGATGATGATGATGGAGCAAGAGCAAGAAGAGGAAGCTGTGCCTGCATGGCTATCGAAGCTTATGGGAGAGAGATTCTTCGGTGAGTGTGGGGCCCACCAGAACCTCCGAAAGAACGACAAGAACGTCCTTTGCCTCCGCTGCTGCCTCTCCCTCTGCCCTCACTGCCTCCCTCTCCACCCACACCACCACCCTCTCCTCCAGGTGAGAAGGTATGTCTACCATGACGTGGTTCGATTGGGTGATCTTGAAAAGCTCATTGATTGCTCCAATATTCAGCCATACACGATTAATGGGGCGAAAGTGATATTCTTGAATGAGAGGGCACAGTCAAGGTCATCATGCAGAGGTGGCACTGGCAACTCTTGCTGCTCTTGTGACAGGATTCTTCAGGACCCCTTCCACTTCTGTTCTCTCTCATGCAAGTTCGAGGGTCTGAGAGTGGATAGTAGTTCGGAGCTAGTTGATGAAGATAATACCCAATTTGCCCCCAATGGCTCTTGCTCCAACACAGATGCCACAGCCAGTAATTCCGTAATTTCAAGTGAAGCCAATAGGAACAAGAACAAGACCAAGACCAAGTCCAAGTCCAATGGCTTCTTCCATTCTCTCGGTAGCAGGCGAAAAGGTGCTCCTCATAGGGCTCCTTTCTGCTAG 681 0.5007 MVRDDEKRMMMMMEQEQEEEAVPAWLSKLMGERFFGECGAHQNLRKNDKNVLCLRCCLSLCPHCLPLHPHHHPLLQVRRYVYHDVVRLGDLEKLIDCSNIQPYTINGAKVIFLNERAQSRSSCRGGTGNSCCSCDRILQDPFHFCSLSCKFEGLRVDSSSELVDEDNTQFAPNGSCSNTDATASNSVISSEANRNKNKTKTKSKSNGFFHSLGSRRKGAPHRAPFC* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4028 226 MobiDBLite consensus disorder prediction 187 226 - -
Ahy3g4028 226 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 23 154 - -
Ahy3g4028 226 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 151 225 - -
Ahy3g4028 226 PANTHER OS02G0172800 PROTEIN 151 225 - -
Ahy3g4028 226 PANTHER OS02G0172800 PROTEIN 23 154 - -
Ahy3g4028 226 Pfam PLATZ transcription factor 78 150 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4028 Ahy-Chr3 139633540 139637425 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ahy3g4028 PLATZ 2.60E-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4299 13 142611881 142615504 Ahy3g4028 3 139633540 139637425 hybridization