Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3855 ATGGATAGTCTCTGTTGCTTCAGCTCTGTTAGAGGGGTGGTTGGAGGGCATTCTTCAAGTAACTCTGGAAAGGGCAAGAGCCATCAGTCTACAACCAAGTATGGCTATAGCCTTGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCATGTAGCGAAATTTGTCCAGTTCAAGGGGCAAGAGCTGGGACTTTTTGCTATATATGATGGACACTTGGGAGATAGCGTACCAGCATATTTACAAAAGCATCTTTTTTCAAATATCTTGGATGAAAAGGACTTTTGGGAAGATCCGTTCATGTCTATTTCTAAAGCTTATGAGACAACAGATCAAGCAATTCTTTCTCACAGTCCTGATTTGGGACGAGGAGGGTCAACTGCTGTGACTGCAATTCTTATAAATAGTCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTGGCTGTACAGATGACTACTGACCATGAACCTAATACTGAGCGGGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGGGTGAATGGGCAGCTTGCAGTTTCGCGAGCATTTGGAGACAGAAACCTCAAAACACATCTGCGATCGGATCCTGACATCCAGTATGCCGATATTAACCCAAATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGGAAACCAAGAGGCTGTAGATATTGCAAAAAGGATAAAGGATCCACAAAGGGCAGCCAAACAACTAGCCACCGAGGCATTGAACAGAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGGGATGA 849 0.4417 MDSLCCFSSVRGVVGGHSSSNSGKGKSHQSTTKYGYSLVKGKANHPMEDYHVAKFVQFKGQELGLFAIYDGHLGDSVPAYLQKHLFSNILDEKDFWEDPFMSISKAYETTDQAILSHSPDLGRGGSTAVTAILINSQKLWVANVGDSRAVLSRGGVAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDRNLKTHLRSDPDIQYADINPNIELLILASDGLWKVMGNQEAVDIAKRIKDPQRAAKQLATEALNRDSKDDISCIVVRFKG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3855 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Ahy3g3855 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
Ahy3g3855 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Ahy3g3855 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Ahy3g3855 282 Gene3D - 15 282 IPR036457 -
Ahy3g3855 282 CDD PP2Cc 33 280 IPR001932 -
Ahy3g3855 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Ahy3g3855 282 SMART PP2C_4 29 278 IPR001932 -
Ahy3g3855 282 SMART PP2C_SIG_2 44 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3855 Ahy-Chr3 137973950 137978454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3855 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.732 3.66e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3855 K17506 - gmx:100801722 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4131 13 140841632 140846088 Ahy3g3855 3 137973950 137978454 hybridization
Ahy3g3855 3 137973950 137978454 Ahy20g0805 20 10256081 10259822 PCT
Ahy3g3855 3 137973950 137978454 Ahy10g0533 10 5266193 5269984 PCT
Ahy20g0805 20 10256081 10259822 Ahy3g3855 3 137973950 137978454 PCT
Ahy10g0533 10 5266193 5269984 Ahy3g3855 3 137973950 137978454 PCT