Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3582 ATGTCGGAAGTTAAGGACCCGGCGATAAAGCTTTTTGGGAGGACGATTCAGCTGCCACTGATCCCCAATGACCCTTCTCCACCACCACCACCACCTCCTCCTCCTCCATCTTCTTCTTCTCCACCAACTGAAGTTGAAGTGAGTTCTGTATCACAACCAGAAACAGAGGAACCATCAAAGAGAGAACTAACCTCAACACAAGATAAAGAAACCACAGAGGATTTGAAATCTCCCACAACAACATCTTCAGGCATATTTGAGAACCCAAAGACTCCCACAAATGGTGGAGAACAGAGTGAGACCAGTGTTTCTCAAGAAAAAACTCCCAAGAAACCGGACAAGATACTTCCGTGTCCGCGATGCAACAGCATGGACACCAAATTCTGCTACTACAACAATTACAACGTCAATCAGCCGCGTCATTTCTGCAAGAACTGTCAGAGATACTGGACTGCCGGAGGAACAATGAGGAACGTGCCAGTAGGCGCTGGTCGCCGAAAGAACAAAAACTCTGCTGCATCGCATTATCGCCAGATAATGGTCCCGGAGGCGCTTCAAGCAGCTCACCTCAATGCCCCCAATGGACTACACAATGCTGTCTTGACCTTTGGCCCAGATTCTCCTCTTTGTGATTCCATGTCCTCTGTATTGAACATTGCAGAAAAAGCCACAAATGGTGTTGTAAACGGGTTTCATGCACCGGAGGCAGCAACTACTTTTGTTTCCTATGGTAGGGATGATGATGGGAATGATCACTCAGTAGGAGTTTCTGGTACAACTTCAACTTCATCAGAGAGGAGAGGCCATGCCAGCTCTCATGAATCGGCGGATAAAAGAGTCGAAAGTTTCCCTCCTCAACTAACTTACTTCCCAAGTAATTCTCCATGGCCGTATCCATGGAATTCGCCAATGCCTCCTCCTCCTCCCACATTTTGCCCTCCAGGCTATCCTATGTCGATATACACCACCCCTTCATACTGGGCATGGAATATGCCATGCATCTCACCCCAATCTCCGGCCCCTGGTTCCGGCCCAAATTCGCCGTTGGGGAAACACTCAAGGGATGGTAACATCATAACCCCGGCCAATTCGCAAAAGGAAAAGCCTAACACAGAAAGCAATAATGTGTTGATCCCCAAGACACTTAGAATTGATGATCCTAGTGAAGCTGCAAAGAGTTCAATATGGTCAACACTAGGAATCAAGAATGAGAAGGCCAACTCTCTCAATGGAGGAGGCCTCTTCAAGGCGTTCCCTTCCAAGGGTAACGACAAGAGTCACGTGGTCGAGGCATCGCCGATGCTGCACGCCAACCCTGCCGCCCTGACGCGGTCTCTCACCTTCCACGAGCGGACCTAG 1359 0.4901 MSEVKDPAIKLFGRTIQLPLIPNDPSPPPPPPPPPPSSSSPPTEVEVSSVSQPETEEPSKRELTSTQDKETTEDLKSPTTTSSGIFENPKTPTNGGEQSETSVSQEKTPKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSAASHYRQIMVPEALQAAHLNAPNGLHNAVLTFGPDSPLCDSMSSVLNIAEKATNGVVNGFHAPEAATTFVSYGRDDDGNDHSVGVSGTTSTSSERRGHASSHESADKRVESFPPQLTYFPSNSPWPYPWNSPMPPPPPTFCPPGYPMSIYTTPSYWAWNMPCISPQSPAPGSGPNSPLGKHSRDGNIITPANSQKEKPNTESNNVLIPKTLRIDDPSEAAKSSIWSTLGIKNEKANSLNGGGLFKAFPSKGNDKSHVVEASPMLHANPAALTRSLTFHERT* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3582 452 MobiDBLite consensus disorder prediction 242 282 - -
Ahy3g3582 452 MobiDBLite consensus disorder prediction 338 373 - -
Ahy3g3582 452 MobiDBLite consensus disorder prediction 357 373 - -
Ahy3g3582 452 Pfam Dof domain, zinc finger 113 170 IPR003851 GO:0003677|GO:0006355
Ahy3g3582 452 MobiDBLite consensus disorder prediction 55 75 - -
Ahy3g3582 452 MobiDBLite consensus disorder prediction 21 41 - -
Ahy3g3582 452 MobiDBLite consensus disorder prediction 1 117 - -
Ahy3g3582 452 MobiDBLite consensus disorder prediction 76 103 - -
Ahy3g3582 452 ProSitePatterns Zinc finger Dof-type signature. 118 154 IPR003851 GO:0003677|GO:0006355
Ahy3g3582 452 PANTHER CYCLIC DOF FACTOR 2 1 452 IPR045174 GO:0003700|GO:0006355
Ahy3g3582 452 ProSiteProfiles Zinc finger Dof-type profile. 116 170 IPR003851 GO:0003677|GO:0006355
Ahy3g3582 452 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3582 Ahy-Chr3 135046083 135049713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3582 1 451 C2C2-Dof Transcription Factor Family AT3G47500 42.916 1.57e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy3g3582 zf-Dof 2.70E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3582 - - gmx:100813315 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3852 13 137911103 137914821 Ahy3g3582 3 135046083 135049713 hybridization