Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0264 ATGGTTTTCTCTTCTATTCCAGTCTATGTAGATCCTCCCAATTGGCAGCAGCAACCGAATCATCATCAAGCAAATGTCAATGATAATCCTCACTTACTTCCGCCGCTACCCACACAGGTCCAGGCAGGACCTGTGGGAGGAGGTGGCGCAATTGCTGGCTCGATCAGACCTGGGTCAATGGCTGATCGAGCCAGGCTAGCAAAGATACCACCTCCAGAGGCTGCCCTCAAGTGTCCACGTTGCGATTCGACGAACACCAAGTTCTGTTACTTCAACAATTACAGCCTGTCTCAGCCCCGCCACTTCTGCAAGGCCTGTAGGCGTTACTGGACAAGAGGTGGTGCTCTGAGGAACGTTCCGGTGGGGGGTGGTTGCCGCCGTAACAAGAAGAACAAGAGGAGTAGTAGCCGCTCGAAATCTCCACCAAACAATAACAATGAAAAGCAACAATCTTCGAGTGCAATTCCTTCAAACAACATCCCTCCTCATGAGCTGATTGGTCATCAACCACCAAACCTTCCTTTCATGGCTTCTCTCCAGAATCATCTTAGCCGCTATGGAGTTGCTTCAAACATGGGTCTGAGCTTAACGGATCATCATCATCCTCAGATGGGGTTTGTTGGTAATTCTGCTTCTGCTATAGCTGCAAGTAATGGAGTAGTAGTGGATCAGTGGCGGCTGCAGCAGTTTCCGTTCTTAAACGGTTTTGATTCGAATTCTTCTTCAGCTGCAGTAGCATCATCAATATCATACCCTAACACTTTTCATCATGAAAATGATCAAGGTTCTTCAGGCTTGGTTGACATAGCTGGAAATTCTAGGGTTAATAATCAGATGCAACCACCAGTGAAAATGGAAGAGAACGGATCAAGACCAACAACAACAACAACAACCAACTTGAATGTCTCTCATCATCAATACTATTCTTGGAACACTGATATGTCAGCTCTAGCTGCTTCTTCTTCCACTCCTCATAATCTCTTATAA 987 0.464 MVFSSIPVYVDPPNWQQQPNHHQANVNDNPHLLPPLPTQVQAGPVGGGGAIAGSIRPGSMADRARLAKIPPPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKNKRSSSRSKSPPNNNNEKQQSSSAIPSNNIPPHELIGHQPPNLPFMASLQNHLSRYGVASNMGLSLTDHHHPQMGFVGNSASAIAASNGVVVDQWRLQQFPFLNGFDSNSSSAAVASSISYPNTFHHENDQGSSGLVDIAGNSRVNNQMQPPVKMEENGSRPTTTTTTNLNVSHHQYYSWNTDMSALAASSSTPHNLL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0264 328 ProSiteProfiles Zinc finger Dof-type profile. 76 130 IPR003851 GO:0003677|GO:0006355
Ahy3g0264 328 MobiDBLite consensus disorder prediction 13 27 - -
Ahy3g0264 328 ProSitePatterns Zinc finger Dof-type signature. 78 114 IPR003851 GO:0003677|GO:0006355
Ahy3g0264 328 MobiDBLite consensus disorder prediction 120 173 - -
Ahy3g0264 328 MobiDBLite consensus disorder prediction 137 159 - -
Ahy3g0264 328 MobiDBLite consensus disorder prediction 13 40 - -
Ahy3g0264 328 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 322 - -
Ahy3g0264 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 322 IPR045174 GO:0003700|GO:0006355
Ahy3g0264 328 MobiDBLite consensus disorder prediction 275 299 - -
Ahy3g0264 328 Pfam Dof domain, zinc finger 75 130 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0264 Ahy-Chr3 2874163 2875818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0264 1 132 C2C2-Dof Transcription Factor Family AT2G37590 60.000 1.93e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy3g0264 zf-Dof 9.40E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0264 - - aip:107629110 481.87