Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2450 ATGGAGAGTGTGTGGAAGCCTAATGTTGAGATATCCCCAAATTGCCCTCGGTGTGGTTCCTCCAACACAAAGTTTTGCTACTACAACAACTACAGCTTAACTCAACCAAGGTACTTTTGCAAGGGCTGTAGAAGGTACTGGACAAAAGGTGGGTCCCTCCGGAACGTTCCGGTCGGCGGCGGCTGCCGGAAGAATAGAAGAGGTAATAAAACCCTAAGACAATCCCTTGAAGGCCTTAATTTCAAGAATTCATCATCATCACCATCACATGATCATACCTCAAATAACCCTAACCCTAACCCTAACTCTATTATTGGCCATCATCATTCTAATAGATCCTCATCACCAGTGATAGCTGATGGACCAAACATTGACCTTGCCCTAGTTTATGCAAATTTCCTCAATCAAAAGCCAAATTCAGGAGATGGGGTGGTTGAGAATAATAACAATAATCAAGATCATCATCATCAATTATTGCAACCAGTTTTTGATGATCCTTCTCTAGAAGATGGTCCAAGTAGTACTAATTTTCCTCCTCATCAAGAGTTTGGTCTTAATGGATGTATAAATCTTCCTGAGCTACCCAAATTTGTTGGTGAGGGAAATAATAACCATCAAATGTACTTAAAAGAGTTCAACTCTTCTATGGAGATTCATCATCAAAGGGATAATAATAATAACAATGATGGACCAATTGAGCATTGTAGTATCAATACTTTTGAGTTGCCACCATTACCGGGTGATGAAGAAGCCTCACATCATCATCATCATCATCATTTGATGTGGTCAAATGATAACAATCCTGAGATGATAATGGTGAACCATGATGCCTTTCATGATCAAATAGCCACACATCATCATCATCATCATCATCCACCACTTTTTGGGAGTGAAGCTCATCATGATGCTGACTTGTTAATTGGTAATTGGAGCCCCTTTGATTTGCCATCATCAAATGATGCTTCTTCATTTTCTAGGCATCGATGA 987 0.3982 MESVWKPNVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNKTLRQSLEGLNFKNSSSSPSHDHTSNNPNPNPNSIIGHHHSNRSSSPVIADGPNIDLALVYANFLNQKPNSGDGVVENNNNNQDHHHQLLQPVFDDPSLEDGPSSTNFPPHQEFGLNGCINLPELPKFVGEGNNNHQMYLKEFNSSMEIHHQRDNNNNNDGPIEHCSINTFELPPLPGDEEASHHHHHHHLMWSNDNNPEMIMVNHDAFHDQIATHHHHHHHPPLFGSEAHHDADLLIGNWSPFDLPSSNDASSFSRHR* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2450 328 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Ahy2g2450 328 MobiDBLite consensus disorder prediction 79 118 - -
Ahy2g2450 328 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 1 320 - -
Ahy2g2450 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 320 IPR045174 GO:0003700|GO:0006355
Ahy2g2450 328 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Ahy2g2450 328 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2450 Ahy-Chr2 100641529 100642624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2450 4 317 C2C2-Dof Transcription Factor Family AT3G52440 37.812 3.09e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy2g2450 zf-Dof 5.30E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2450 - - adu:110277481 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2862 12 118248667 118249947 Ahy2g2450 2 100641529 100642624 hybridization