Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3173 ATGGCTACACTCATTGCTCCTACAAACCACTCCCCTCTTGAAGATGCAGAAGCTATCCGAAAGGCCGTCAAAGGATGGGGAACTGATGAAAAAGTGATTATAACAATACTTGGTCACAGAGATGCAATTCAAAGGCAAAAAATCAGAGAAGCATATTATGAACTCTTTCAAGAAGATCTCATCAAACGCCTTGAATCAGAGCTCTCCGGTGACTTTGAGAGAGCCATGTACCGGTGGATAGTTGAGCCTTCAGAACGTTATGCATTGTTGGCCAATATAGCCCTCAGGCATGCTGACAGAAACTATGACGTCATCGTCGAAATCGCATGCGCCCTCTCGCCGGAAGAGCTCTTTATCGTAAGGCGCACCTACCATAACCGTTATCATCATTCCTTGGAAGAAGATGTGGCCGCTAATACTAGCGGCCATCTTCGCCAGCTATTGGTTGGGTTGGTGAGCTCATTTAGGTATGGTGGGAATGAGATCAATGTAAAGTTGGCACAAAGTGAAGCAGATATTCTTCATGAGGCCATAAAACTAAAAGATAAGAATGGTAACAAAGATGAAGAAGTTATAAGAATCCTTACAACAAGAAGCAAGATCCAACTTGTTGCAACTTTCAATCGCTATAGAGATGACCATGGAATTGCCATTACCAAGAAATTGTCCGATGAAGCATCTGATGACTTTCACAAGGCAGTGCACATAGCTATTCGCTGCATCCAAGATCATAAGAAATACTATGAAAAGGTTCTACGAAATGCAATGAAAGGAGGTGGAACCAATGAGGATGCACTGACACGTGTGATTGTGACAAGGGCTGAGAAAGACTTAAATGACATCAAAGAGATTTATTATAAGAGAAACAGTGTTCACTTAGAGGATTCAGTGGCTAAAGAAACTTCAGGAGACTACAAGAAATTTCTCCTAACCTTGATGGGAAAGGAGGACTAA 954 0.4214 MATLIAPTNHSPLEDAEAIRKAVKGWGTDEKVIITILGHRDAIQRQKIREAYYELFQEDLIKRLESELSGDFERAMYRWIVEPSERYALLANIALRHADRNYDVIVEIACALSPEELFIVRRTYHNRYHHSLEEDVAANTSGHLRQLLVGLVSSFRYGGNEINVKLAQSEADILHEAIKLKDKNGNKDEEVIRILTTRSKIQLVATFNRYRDDHGIAITKKLSDEASDDFHKAVHIAIRCIQDHKKYYEKVLRNAMKGGGTNEDALTRVIVTRAEKDLNDIKEIYYKRNSVHLEDSVAKETSGDYKKFLLTLMGKED* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3173 317 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 ProSiteProfiles Annexin repeat profile. 243 314 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 SMART annex3 260 312 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 SMART annex3 185 238 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 PANTHER ANNEXIN 6 317 - -
Ahy20g3173 317 Gene3D Annexin 2 81 IPR037104 GO:0005509|GO:0005544
Ahy20g3173 317 ProSiteProfiles Annexin repeat profile. 165 239 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 ProSitePatterns Annexin repeat signature. 260 312 IPR018252 GO:0005509|GO:0005544
Ahy20g3173 317 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Ahy20g3173 317 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Ahy20g3173 317 PRINTS Annexin family signature 256 276 IPR001464 GO:0005509|GO:0005544
Ahy20g3173 317 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Ahy20g3173 317 PRINTS Annexin family signature 300 313 IPR001464 GO:0005509|GO:0005544
Ahy20g3173 317 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
Ahy20g3173 317 Gene3D Annexin 164 242 IPR037104 GO:0005509|GO:0005544
Ahy20g3173 317 PRINTS Plant annexin signature 160 180 IPR009118 -
Ahy20g3173 317 PRINTS Plant annexin signature 118 132 IPR009118 -
Ahy20g3173 317 PRINTS Plant annexin signature 228 246 IPR009118 -
Ahy20g3173 317 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 Gene3D Annexin 245 315 IPR037104 GO:0005509|GO:0005544
Ahy20g3173 317 PANTHER ANNEXIN 6 317 - -
Ahy20g3173 317 SUPERFAMILY Annexin 3 316 IPR037104 GO:0005509|GO:0005544
Ahy20g3173 317 Pfam Annexin 92 151 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 Pfam Annexin 170 234 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Ahy20g3173 317 Pfam Annexin 250 312 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3173 Ahy-Chr20 142402135 142407314 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3173 20 142402135 142407314 Ahy20g3173 20 142402135 142407314 ECH