Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3153 ATGGTTCCATGTAGGTCCGTGCCTGACTATGGCAGATTCAAACCATACATAGATCACGTTTGCATCAAAAGAATCGAATCTCACCTTCTCTTCACACACACTCATTACTCATTAATCCCAAAATCCTCTAATAAGAACAACAAAATGAGTATGTTAGGCCTCACAGACTTAGTTTTCATAGCTCCAAATCCTTCTTCTCTTCACCACCATCGCCAACAACAACTGATTTCAACGGAAAACGACAACAACAACAACCCTCTGAGCGTTGGTTTCGGCATTTTTCCACTCTTAGCAGCCACGCCCTGCGTTCAGGTAGTTCAGAATCAGAGCAATGAGGAGGCGATGGAAGATTCTGGAAAGAAGAAGAAGAAGATCGACGAAGATGAAAATGGCGGTGAATTTAGGGTTTGTACGGACTGCGGAAACAGAGCGAAGAAAGATTGCGTGTACAGACGGTGCAGGAGTTGTTGCAAGGGGCGTGGATATGACTGTACCACTCACGTGAGGAGCACGTGGGTCCCTGCTCTGAAACGCCGCGAGCGCCACGTGGCGGTGACTGGTGTTGGTGGAGAAGCTGCTAATAAGAGGACAAAGAACAATAATGGATGTGCAAGTGGAAGTGCTACCTCTCATTCTCATACTTCCACCAACTCTGATTCCTGCTATTCTCATCAAGATGCTAGGTTCAAAGAATCATTGCCAGGTCATGTTCGTGCACCTGCTGTGTTCAGATGCCATAGAGTCTCAACTGTTGGAAATGGTGAAAATGAATTTGCATATTTAGCAACGGTTCATATAAGTGGCCATGTATTCAGGGGATTTCTCTATGACCATGGTGTTGATCCCAAAAATACAATAATGCCCTCCTATGCTTCAGAACTTCAACTAGGAAACAACTGCATAAGTAATGGGAAGAACAAGGAATGTTCTTCTTCTGCAATTGGGGTTACAACCAATGAATATGATAATCTCTATTCTGCTTCTGCTGCTAGCTAG 996 0.4438 MVPCRSVPDYGRFKPYIDHVCIKRIESHLLFTHTHYSLIPKSSNKNNKMSMLGLTDLVFIAPNPSSLHHHRQQQLISTENDNNNNPLSVGFGIFPLLAATPCVQVVQNQSNEEAMEDSGKKKKKIDEDENGGEFRVCTDCGNRAKKDCVYRRCRSCCKGRGYDCTTHVRSTWVPALKRRERHVAVTGVGGEAANKRTKNNNGCASGSATSHSHTSTNSDSCYSHQDARFKESLPGHVRAPAVFRCHRVSTVGNGENEFAYLATVHISGHVFRGFLYDHGVDPKNTIMPSYASELQLGNNCISNGKNKECSSSAIGVTTNEYDNLYSASAAS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3153 331 Pfam Domain of unknown function (DUF702) 136 281 - -
Ahy20g3153 331 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 233 280 IPR006511 -
Ahy20g3153 331 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 112 322 - -
Ahy20g3153 331 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 50 105 - -
Ahy20g3153 331 MobiDBLite consensus disorder prediction 193 217 - -
Ahy20g3153 331 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 112 322 IPR007818 GO:0003700|GO:0006355
Ahy20g3153 331 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 50 105 IPR007818 GO:0003700|GO:0006355
Ahy20g3153 331 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 136 178 IPR006510 -
Ahy20g3153 331 MobiDBLite consensus disorder prediction 190 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3153 Ahy-Chr20 142198279 142201883 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Ahy20g3153 DUF702 2.50E-52 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3153 20 142198279 142201883 Ahy10g2592 10 115422220 115426120 hybridization