Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3120 ATGGATCTTGCAAACAACACAGCAGGTGCTTCAGAAAGGCCTGCAAAACACAACGAAGGTGCTATAGGAAGTCCTATAAATAATAAAGCCAGTTATGCAGGAATTCCTTCAAACAATGAAGTGGCCGGCACAGGAATTCCTGTTACGGACCTTTCAGTTAGTTCAGCAAATCCTGCAAAAGACGAACCAGGTGGTGCTAACCATGTAAATGACCAAGCTGATAGTTCAGAAAATCTTGCAAAGGACAAATTAGATGGTGCAGAAAATTCTGATGAAGACAAACCTGATTCTCCCATAAACCTTGTAAATTACCGATCAGGTGGTGCAGAAAATCCACCAAATGACAAATTCAGTAGTGCAGAAATGCCTGTGAAGGAACTAGCAGCTGGTATAGGAACTCCTGTAGGTACTGCAGAAAGTCCTGTGAAGAGAAAAGATGGTTCAGAAAATCCTATAAATAATACAAAAGGTGATATAGAAACTTCTGTACATGACAAGGCAGATTCTGCTGAAAATGCTGTGGATGACAAAACACGTGGCATAGAAAATCTTGTAAATGATAAAGCAGATGAAGTAGAAAGTCCTTTAAACAAACAAGCAGATGCTGCAGAAACTCCTGTAAAAGTCAAACAACTGGCTGCTGAAAACATTGTAGAATACAAAGCAGATGCTGTTGAATGCCCTGTAGACAGCAACATAAATCGTCTTCCAGCTGAAGCAAAGGAGATATTAATATCACTGGCAAGTAAATGGGAGGATGTGTTGGATCCAAATGCATTGCAGGTGATTCCTCTCAAAGGGGCAATGACAAATGTGGTATTTCAGATAAAGTGGAGAACTAAAGCTGGGGAAACATCACGGAAGGTTCTAGTTAGAATCTATGGTGAGGGTGTTGACGTTTTCTTTGATAGGCATGATGAGATCCGGACATTTGAATTCATGTCAAAACATGGGCAGGGACCATCTCTACTAGGACGGTTTGCAAATGGTCGCGTCGAAGAATTTATCCACGCACGGACATTATCAGCATCTGATCTGCGTGAACCATCAATCTCTGCTCTTATAGCAGCCAAAATGAAGGAGTTCCACGATCTTGACATGCCTGGTGAAAAGAAAGTCCACCTTTGGGATAGATTACGAACATGGCTTGGCGAGGCCAAACGTTTGTCATCCCCTAAAGAAGTGGAGGCCTTTTATTTGGACATAATTGACAGGGAAATCTTTGTTTTGCAAAATGAACTATCAGGTGCTGCAAGCCAACGGATAGGATTTTGCCACAATGATTTGCAGTATGGTAACATAATGCTTGATGAAGAGACCAATGCTGTCACCATAATAGATTATGAATATGCAAGTTATAATCCTGTAGCATATGACATAGCAAACCACTTCTGTGAGATGGCTGCTAACTATCATACAGAAACACCTCATATTCTCAACTACAAGAACTATCCTGATCTTGAGGAGCGTAGAAGATTTGTGAACACATATTTGAGTTCCTCAGGTGCGCAACCAAATGGCAGTGAAGTGGAGGATCTACTTCAAGAAATTGAGAAGTATACACTTGCAAATCATATTTTCTGGGGCGTTTGGGGAATAATTTCGGCTCAAGTAAACAAAATTGATTTCAACTACAAGGAGTATGCGAAACAGAGGTTTCAAGAATACTGGACAAGGAAACCTTATCTTTTAAGCCATGATGCTCCCTCTCCTTATAATGCACCTTCTCCTTATAACAATCCTGCCGAGGGTACAGGAGAGCTAGCAGCGCCACCACAACCACCACCACCACCACCAACTCATGCAAGGAAGAGCTCGGGTATCTTTAAAAAGATGAAGAGAGTTTTAGGTCTTGGCTTGTTCAGGTCCTCCAAGAACTCCTCCAGTTAG 1890 0.4159 MDLANNTAGASERPAKHNEGAIGSPINNKASYAGIPSNNEVAGTGIPVTDLSVSSANPAKDEPGGANHVNDQADSSENLAKDKLDGAENSDEDKPDSPINLVNYRSGGAENPPNDKFSSAEMPVKELAAGIGTPVGTAESPVKRKDGSENPINNTKGDIETSVHDKADSAENAVDDKTRGIENLVNDKADEVESPLNKQADAAETPVKVKQLAAENIVEYKADAVECPVDSNINRLPAEAKEILISLASKWEDVLDPNALQVIPLKGAMTNVVFQIKWRTKAGETSRKVLVRIYGEGVDVFFDRHDEIRTFEFMSKHGQGPSLLGRFANGRVEEFIHARTLSASDLREPSISALIAAKMKEFHDLDMPGEKKVHLWDRLRTWLGEAKRLSSPKEVEAFYLDIIDREIFVLQNELSGAASQRIGFCHNDLQYGNIMLDEETNAVTIIDYEYASYNPVAYDIANHFCEMAANYHTETPHILNYKNYPDLEERRRFVNTYLSSSGAQPNGSEVEDLLQEIEKYTLANHIFWGVWGIISAQVNKIDFNYKEYAKQRFQEYWTRKPYLLSHDAPSPYNAPSPYNNPAEGTGELAAPPQPPPPPPTHARKSSGIFKKMKRVLGLGLFRSSKNSSS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3120 629 MobiDBLite consensus disorder prediction 1 200 - -
Ahy20g3120 629 Gene3D Phosphorylase Kinase; domain 1 249 335 - -
Ahy20g3120 629 Gene3D - 295 557 - -
Ahy20g3120 629 MobiDBLite consensus disorder prediction 588 602 - -
Ahy20g3120 629 MobiDBLite consensus disorder prediction 75 95 - -
Ahy20g3120 629 SUPERFAMILY Protein kinase-like (PK-like) 233 564 IPR011009 -
Ahy20g3120 629 PANTHER CHOLINE KINASE 2-RELATED 224 570 - -
Ahy20g3120 629 MobiDBLite consensus disorder prediction 159 197 - -
Ahy20g3120 629 CDD ETNK_euk 260 559 - -
Ahy20g3120 629 PANTHER CHOLINE/ETHANOALAMINE KINASE 224 570 - -
Ahy20g3120 629 Coils Coil 167 187 - -
Ahy20g3120 629 MobiDBLite consensus disorder prediction 571 606 - -
Ahy20g3120 629 MobiDBLite consensus disorder prediction 30 56 - -
Ahy20g3120 629 Pfam Choline/ethanolamine kinase 286 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3120 Ahy-Chr20 141852747 141860156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3120 229 565 Acyl Lipid Metabolism Gene Families AT1G74320 66.469 6.98e-172 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3120 20 141852747 141860156 Ahy20g3120 20 141852747 141860156 ECH
Ahy20g3120 20 141852747 141860156 Ahy10g2560 10 115099208 115106652 hybridization