Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3115 ATGGACACAAACAAAATGAGGCCTATTACAGCTGCAACCAATTTTGCTGCCACAGGTTGGAAATCTACTGAGCGCCGTAGAATAATGGTTAACAAAATTGCAGATTTTGTACTCAAGAATGGTCCTCCCTCTTGGAAACAAAATTTACCCTTACTTCTAGGGTCTGTAGAAACTTTTGAGGAGAAAGTGTTTGCGTCATCCAAAGTCGAGGCTGAGTACATTGCAAAGATATCAGAAAAGCTGAAGTCAATAGCACCATCACGTCAAAGTGCTGAAAATCTCTTACCCCAAAACTCTTCTATCTCAAGAGAAGAAGAAATTAAAGCAATCAGAGAGTGGCAAGAACAGGTTTATCAAAAGGTACAAATGATAAAAGCAACATATTACACAAAACTTGATACTTTTCACAAATTGATAAGTAGAAAGCTTCAGCAGCTCAAGAATGAGCCTGCTCCTCTACATCCTAAGACGATAACTGATATGGAGGGATGCGAACAACATAAGCGAGCACTGGAATACATTTTTTTATTATTGAATGTGGACAAAAGCAAGATTGATCGCGGTTTCAAGCAGAGACTAGATAGACTGGAAAAGTACATACAAGATGTTTTACAAAAGAAATACTTCTCTTACTGTCAACAACAATGTTCTTTTGACGTGCAATCCAAGCAACAGGTTGAGCCATCAAATTCAATCAGTTCTCAATTGGAACTATCTGGAAAGAAACCAGCCTCGCAAGTAATAAGCCTACCGAGTTCCCATTTAACAAAGCAGATTCCTTACCTAACATTACAAGAGGTAAACCAATTTTGCAGTTCGCGACAGGGAAATCAAGTGTCAGAAAAAGGTTGTGAAAATCATGCAGTAGAACCACAAATAGGAGTTGAGATCAAACCATCCGAAGCTTTTGTGAATGAACCAGCTGATATTCCCGATGATACAAGCCCAGCAATGAAGCACTTTATTAAAGTGTTTAGGTCAATGTCAGCTGAAGCATTCATAGCTGCAACTGATGACATTGGACTAGCACTCCATTTAAATGATGACATACCAGAAATTTCAACTGATGAAAATGCAAACTTGAATTGCTACGATCCTGTTCCAACAGGAAAGAAAATAAAGCGATTCTTTAATTCAACTCCTGCAAGTGGCAGTTCCGGGCAGTTCATCAGTGCAGAGAAGCCTGCCTCAATATCTAAGGAAATTTATACTATCTTAGAAGAAATAAAAGTGATAAACAACTTACTGATAGACACTCAAGTAGTTATTAGCGAAGGAAACACCATTACAGGAGTAGCTGAGGGTGCACCAGAACATGATGAAGGACTATTTGTCAAATTGGTTTTCAATTCAGTAACTGTTAATCTACCCCCGACAGCAGAGCAAGCTACTAACAAAGAGTCGATAATCAAACCGTTACATTTGTTTGTTCCCGGGTGTTATCCACTTCTCTCACCAGTTATTTCAGATGAAACACCATCAGAAATCAGAGTGGATGTCGACGTGGACGATCTGTCAAGTAAAGCGAATCTGAAACTGAGACTTTCTCTAAGAAGCATGAATGAGCCTTTGTCACTGCAGAATATAGCAGTGTCATGGGATCAGTGTGTTAGAGAAGCAATATGTGAGTATGCGCAAAAACATGGTGGAGGAACCTTTAGCTCTAAATATGGAGGATGGGAGCTATGTTCCAATGGTTTTTGA 1704 0.392 MDTNKMRPITAATNFAATGWKSTERRRIMVNKIADFVLKNGPPSWKQNLPLLLGSVETFEEKVFASSKVEAEYIAKISEKLKSIAPSRQSAENLLPQNSSISREEEIKAIREWQEQVYQKVQMIKATYYTKLDTFHKLISRKLQQLKNEPAPLHPKTITDMEGCEQHKRALEYIFLLLNVDKSKIDRGFKQRLDRLEKYIQDVLQKKYFSYCQQQCSFDVQSKQQVEPSNSISSQLELSGKKPASQVISLPSSHLTKQIPYLTLQEVNQFCSSRQGNQVSEKGCENHAVEPQIGVEIKPSEAFVNEPADIPDDTSPAMKHFIKVFRSMSAEAFIAATDDIGLALHLNDDIPEISTDENANLNCYDPVPTGKKIKRFFNSTPASGSSGQFISAEKPASISKEIYTILEEIKVINNLLIDTQVVISEGNTITGVAEGAPEHDEGLFVKLVFNSVTVNLPPTAEQATNKESIIKPLHLFVPGCYPLLSPVISDETPSEIRVDVDVDDLSSKANLKLRLSLRSMNEPLSLQNIAVSWDQCVREAICEYAQKHGGGTFSSKYGGWELCSNGF* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3115 567 Gene3D Coactivator CBP, KIX domain 16 93 IPR036529 GO:0003712|GO:0006355
Ahy20g3115 567 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 93 558 IPR044661 GO:0003713|GO:0031490
Ahy20g3115 567 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 93 558 - -
Ahy20g3115 567 Pfam KIX domain 23 92 IPR036546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3115 Ahy-Chr20 141784210 141791271 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3115 20 141784210 141791271 Ahy20g3115 20 141784210 141791271 ECH
Ahy20g3115 20 141784210 141791271 Ahy10g2554 10 115048131 115055037 hybridization