Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3113 ATGATGGAAACAAAACAGACCACTACTCTGCATAGATTATTTCTTTGGTTCTTCTTGATGAACATCTTCATCACCATTACCAGAACAAAAGCACAATCATCAACCCTAAACTACGTTGGAGATGACTGCCAAAACTCGACAAAACAATCTCTAACAAGTGGATTCAAAACCAACCTCAACAGCGTCCTCTCATGGCTTTCCTCTGATGCTACCACAAGCAAGGGCTACAACTATACCACCGTCGGAACCGCCACACGCGATGCCGTCTATGGCTTCTACAACTGCAGAGGTGATGTCACCGGAACCTTCTGCCAGTTTTGCCTCTCCACTGCAGCTTCAGACATTCTCCAGCACTGCCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCTAACCATGCCTTCTATGGTAATCTTACAACTACCCCATCATGGCAAACTCTTGGGACCAAGAACAGCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTATATGCAGATTTTGATAAAGAATGCTACTGCAGAGAACAATTACCTGTTGTATGCAGTGGGTGAGTTCAATGCTGGTGATTCATTAGGGAAAAGGTATGGATTGGTGCAGTGTACTAGGGACCTTACTAGTGACAAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTGGATCTCCAAGCTGTTTGACAAGGTATGATGATTATATGTTCTACAAGATTCAAGGATCTTCTCCTTTGCCTAATTCAGCCAAGAACAATTCAAGCAAGACAAAAACTGTGATCATCATCATAGCATGTGTGTTGGTGCCAGTAGTGCTACTAATTTCTGGCGTCTACTTATTATGGAGGAAGAATCAAATAGACAATGATGCATTATTGCCAGAGGACACTCCTATATCAATACAGTATAACTCTCAAGAAGGTCAAGGAGACGATTCATTGAATGCTGACCTTCCGGCAGTTCCTCTGATTTGGATTCGACAGAGCACTAATAACTTTTCAAATTCTTGCAAATTAGGGGAAGGTGGTTTTGGTCCCGTTTATAAGGGAAGTTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTTTCAAAAACATCTGGTCAAGGTTTATATGAGTTCAAGAATGAAGTAATATTCATAGCCAAATTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGCAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCACCTATTCGATGTGGAAAAACGAAAGCATCTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTATACCTTCACGAAGATTCTAGACTTAAAGTAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATTTCAGATTTTGGATTAGCAAGAGCATTTGAAAAAGGCCAAGACGAAGAAAATACTGGAAGGGTTATGGGCACCTACGGATATATGGCTCCTGAATATGCCATGGAAGGATTATATTCAATAAAATCAGACGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATCATTTGTGGCAAAAAGAGCAGCGGATTCTATTTTTCAGAACATGGTCAAAGTCTTCTTATATATAGTTGGAAACTATGGTGTAAAGGAGAATGTTTGGAGCTAGTAGATCCTATACTAGAAGATAAATACCCAAGAAATGAAGTTAAAAGGTATATACATATTGGTTTACTGTGTGTACAAGCAGATGCAGTAGATCGACCAACAATGTCTACAATTGTTGTGATGCTAGCAAACGAGACAATGTCACTTCCTAATCCTAACCATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGACGAGCCACCATCAAATACTTTTGTTAAGGATCTTTCGGTCAATAAAATATCAGTTTCAAATAGTTTACCTAGGTAA 2010 0.3945 MMETKQTTTLHRLFLWFFLMNIFITITRTKAQSSTLNYVGDDCQNSTKQSLTSGFKTNLNSVLSWLSSDATTSKGYNYTTVGTATRDAVYGFYNCRGDVTGTFCQFCLSTAASDILQHCPNRSSAVIWYNYCILRYSNHAFYGNLTTTPSWQTLGTKNSTNSTQELQKAETYMQILIKNATAENNYLLYAVGEFNAGDSLGKRYGLVQCTRDLTSDKCRQCLNAMLDQVPKCCASKVGWQVGSPSCLTRYDDYMFYKIQGSSPLPNSAKNNSSKTKTVIIIIACVLVPVVLLISGVYLLWRKNQIDNDALLPEDTPISIQYNSQEGQGDDSLNADLPAVPLIWIRQSTNNFSNSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLYEFKNEVIFIAKLQHRNLVRLLGCCVEQNEKLLIYEYMSNSSLALHLFDVEKRKHLSWKVRMNIIKGIARGLLYLHEDSRLKVIHRDMKASNVLLDQDMNPKISDFGLARAFEKGQDEENTGRVMGTYGYMAPEYAMEGLYSIKSDVFSFGVLLLEIICGKKSSGFYFSEHGQSLLIYSWKLWCKGECLELVDPILEDKYPRNEVKRYIHIGLLCVQADAVDRPTMSTIVVMLANETMSLPNPNHPAFSVGRKIKDEPPSNTFVKDLSVNKISVSNSLPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3113 669 SMART serkin_6 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3113 669 ProSiteProfiles Protein kinase domain profile. 351 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3113 669 Pfam Salt stress response/antifungal 43 138 IPR002902 -
Ahy20g3113 669 Pfam Salt stress response/antifungal 162 253 IPR002902 -
Ahy20g3113 669 Gene3D - 36 141 IPR038408 -
Ahy20g3113 669 Gene3D - 148 255 IPR038408 -
Ahy20g3113 669 Pfam Protein tyrosine and serine/threonine kinase 355 621 IPR001245 GO:0004672|GO:0006468
Ahy20g3113 669 CDD STKc_IRAK 357 622 - -
Ahy20g3113 669 ProSiteProfiles Gnk2-homologous domain profile. 147 255 IPR002902 -
Ahy20g3113 669 Gene3D Phosphorylase Kinase; domain 1 315 426 - -
Ahy20g3113 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Ahy20g3113 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 667 - -
Ahy20g3113 669 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
Ahy20g3113 669 Gene3D Transferase(Phosphotransferase) domain 1 427 632 - -
Ahy20g3113 669 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 29 667 - -
Ahy20g3113 669 SUPERFAMILY Protein kinase-like (PK-like) 336 637 IPR011009 -
Ahy20g3113 669 Pfam Domain of unknown function (DUF3403) 624 669 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3113 Ahy-Chr20 141766520 141771419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3113 5 668 Receptor kinase-like Gene Family AT4G05200 41.414 3.04e-164 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g3113 PK_Tyr_Ser-Thr 3.80E-49 CL0016