Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3109 ATGATGGAAACGAAGCTCACTACTACTATCCATGGATTATTTCTGTGGTTCTTCTTGCTGAGCTTCTTCATCTCCTTCACCACAACAAGAGCACAATCATCGTCCCCAAACTACGTTGGAGATGATTGCAAAAACTCGACGGAAGAATCCCTAACAAGTGGATTCAAAACCAACCTCAACAGCATCCTCTCATGGCTTTCCTCTGATGCTGCCACAAGCAAGGGCTACAACCATACCGCCATCGGAACCGCCACTCGCGATGCCGTCTATGGCCTCTATGACTGCAGAGGTGACGTGACAGGCACCTTCTGCCAGTTTTGCGTGTCCACTGCAGCTTCAGACATTGTTCAGCACTGTCCAAACAGATCATCAGCAGTGATATGGTACAACTACTGCATACTCAGATACTCCAACCATGACTTCTTTGGAAACCTTACAATAACCCCATCGTGGCAATTTCCTGGGACCAAGAACAGCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTACATGCAGAGCTTGATAAAGAATGCTACTGTGGAGACCAACTTGCTGTATGCAATGGGTGAGTTCAATTCTGGTGGTTCTTCAGGGGAAAGGTATGGGTTGGTGCAGTGTAGTAGGGACCTTACTAGTGATCAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTTTGGCTCCAAGTTGTTTGATCAAGTATGATGATTTTATGTTCTACAAGATTACTACCAGTCAAGGACCTTCTCCATCATTCAATTCAGCCAATAATAAGGGTACAAGTAAGACAAAAACGTTGATAATCATCATAGTGAGTGTGTTGGTGGCATTAGTTCTACTAAGTTGTGGCATCTACTTCTTATGGAGGAAGAATCAATCAAATAATGATGCATTATTGTCAGAGACCACTCCTATATCAATACATTATAACCCATATCAAGGTCAAGGAGACGATTCATTGAATGCTGACCTTCCTACAATCCCTCTATTTTGGATTCGACAGAGCACTAATAACTTTTCAGATTCTTGCAAATTAGGGGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGCTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTCTCAAAAACATCTGGCCAAGGTTTAGATGAGTTCAAGAATGAAGTAATCTTCATAGCCAAACTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGGAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCATCTATTCGACATGGAAAAACGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTATACCTTCATGAAGATTCTAGACTTAAAATAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATATCAGATTTTGGACTAGCAAGGACATTTGAAAAAGGCCAGAACGAAGAAAACACTAGAAGGGTTATGGGCACCTACGGATATATGGCTCCCGAATATGCTATGGAAGGGTTATATTCAGTAAAATCAGACGTTTTTAGTTTTGGAGTTCTTTTACTAGAAATCATTGCTGGCAAAAGGAATAGTGGATTCTATCTTTCAGATCATGGTCAAAGTCTTCTTGTATATAGTTGGAAACTATGGTGTGAAGGAGAATGTTTAGAGTTAGTAGATCCTATATTAGAAAATACATACATAAGAAATGAAGTTACAAGGTGTATTCATATTGGTTTGCTATGTGTACAAGAAGATGCAATAGATCGACCAACAATGTCTACAGTGGTTGTTATGCTAGCAAGTGAGACAATGACACTTCCTAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGTTCGGTAAAGAAGACGAGTCAACGTCAAAGACTTCTAAAGATAATATCTCTGTCAATGAAGTATCAATCTCAAATGTTTTTCCTAGATAA 2025 0.399 MMETKLTTTIHGLFLWFFLLSFFISFTTTRAQSSSPNYVGDDCKNSTEESLTSGFKTNLNSILSWLSSDAATSKGYNHTAIGTATRDAVYGLYDCRGDVTGTFCQFCVSTAASDIVQHCPNRSSAVIWYNYCILRYSNHDFFGNLTITPSWQFPGTKNSTNSTQELQKAETYMQSLIKNATVETNLLYAMGEFNSGGSSGERYGLVQCSRDLTSDQCRQCLNAMLDQVPKCCASKVGWQVLAPSCLIKYDDFMFYKITTSQGPSPSFNSANNKGTSKTKTLIIIIVSVLVALVLLSCGIYFLWRKNQSNNDALLSETTPISIHYNPYQGQGDDSLNADLPTIPLFWIRQSTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLDEFKNEVIFIAKLQHRNLVRLLGCCVEENEKLLIYEYMSNSSLALHLFDMEKRKQLSWKVRMNIIKGIARGLLYLHEDSRLKIIHRDMKASNVLLDQDMNPKISDFGLARTFEKGQNEENTRRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIIAGKRNSGFYLSDHGQSLLVYSWKLWCEGECLELVDPILENTYIRNEVTRCIHIGLLCVQEDAIDRPTMSTVVVMLASETMTLPNPNHPAFSVGRKFGKEDESTSKTSKDNISVNEVSISNVFPR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3109 674 CDD STKc_IRAK 360 625 - -
Ahy20g3109 674 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Ahy20g3109 674 Pfam Salt stress response/antifungal 43 138 IPR002902 -
Ahy20g3109 674 Gene3D Transferase(Phosphotransferase) domain 1 430 634 - -
Ahy20g3109 674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 671 - -
Ahy20g3109 674 PANTHER PROTEIN KINASE DOMAIN 28 671 - -
Ahy20g3109 674 Pfam Protein tyrosine and serine/threonine kinase 358 623 IPR001245 GO:0004672|GO:0006468
Ahy20g3109 674 Gene3D - 150 254 IPR038408 -
Ahy20g3109 674 Gene3D - 37 141 IPR038408 -
Ahy20g3109 674 Gene3D Phosphorylase Kinase; domain 1 325 429 - -
Ahy20g3109 674 SMART serkin_6 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3109 674 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
Ahy20g3109 674 ProSiteProfiles Gnk2-homologous domain profile. 147 254 IPR002902 -
Ahy20g3109 674 SUPERFAMILY Protein kinase-like (PK-like) 339 638 IPR011009 -
Ahy20g3109 674 Pfam Domain of unknown function (DUF3403) 627 674 IPR021820 GO:0004674
Ahy20g3109 674 ProSiteProfiles Protein kinase domain profile. 354 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3109 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3109 Ahy-Chr20 141741349 141749412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3109 19 674 Receptor kinase-like Gene Family AT4G05200 42.647 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g3109 PK_Tyr_Ser-Thr 2.80E-48 CL0016