Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3098 ATGGTAAGTGATTTTCATATTGCCAAAAGAGAGGAAGACATAAGTGGCTATGCTGGTTATGTAGGATCTGCATTCATGTTTGGAAGAGCGTTGACATCTATATTGTGGGGAATAATTGCTGATCGCTTTGGTAGAAAACCTGTTATAATTATAGGGATTATTGCAGTTATAATTTTCAACACACTATTTGGGCTTAGCACAAGCTTTTGGATGGCAGTTACCACAAGATTTTTTCTGGGAAGTTTGAATGGTTTGCTTGGACCAATGAAGGCTTATAGTTCTGAAATATTTCGAGAAGAAAACCAAGCCTTAGGACTCTCAACCTTTAGTGCAGCTTGGGGCATAGGTTTAGTCATTGGACCAGCATTGGGAGGCTACCTTGCTCAGCCAGTAGTGAAATACCCCAATGTATTTCCAAAAAACTCAATTTGGGATAAGTTCCCATACTTCTTGCCCTCATTGATAATATCAATTTTTTCCTTTGTGGTATTAATTCTCTGCATCTGGCTTCCGGAAACACTACACAACCATCCTCGGATCCATCGAGACGAGTCTGCCGCCGGTGGCCACGACGATGATTCTTTAGAAACCGGCGGCACCGGGTCTGATGATAAAGACAAAACAATCCAAAAGGATGAAAACCTCTTTTTGAATTGGCCTTTAATGTCATCAATAATTGTTTATTGTGTGTTCTCCCTCCATGATATGGCTTACCAAGAGGTTTTTTCATTATGGGCTGTAAGTCCTAGAAGATTGGGGGGTTTGAACTTTACAACAGACAATGTTGGTGATGTTCTTTCAGTAACAGGTACTGGTCTTATAATATATCAGCTTTTTCTATACCCAAAATTGGAAAAAGCTTTTGGGCCTATTGGGCTTGCTCGCATTGCTGGGGTAGTATCCATACCTCTGTTACAGAGTTACCCCTTCATAGCAATGTTGTCAGGATTCACACTCTACCTTCTCATAAATATTGCTTCTGTCTCTAAAAACCTTCTGCAGGTGTCCATTATAACTGGTATGTTCCTGCTTCAAAATAGAGCAGTGGAACAACATCAAAGAGGGGCAGCTAATGGCATTGCCATGACTGCTATGTCAATTTTCAAAACAATTGGTCCAGCTGGAGGAGGGGCAATATTAGCTTGGTCACAGAAAAGGATGGATGCTTCTTTTCTACCAGGAGTTCATATGTTGTTCTTTATCCTGAATATTGTTATGGGACTTGGAGTGCTTTTACTATTTACACCATTCCTCACCATAAGGAAGAACATACCCACAAGTTAA 1284 0.4042 MVSDFHIAKREEDISGYAGYVGSAFMFGRALTSILWGIIADRFGRKPVIIIGIIAVIIFNTLFGLSTSFWMAVTTRFFLGSLNGLLGPMKAYSSEIFREENQALGLSTFSAAWGIGLVIGPALGGYLAQPVVKYPNVFPKNSIWDKFPYFLPSLIISIFSFVVLILCIWLPETLHNHPRIHRDESAAGGHDDDSLETGGTGSDDKDKTIQKDENLFLNWPLMSSIIVYCVFSLHDMAYQEVFSLWAVSPRRLGGLNFTTDNVGDVLSVTGTGLIIYQLFLYPKLEKAFGPIGLARIAGVVSIPLLQSYPFIAMLSGFTLYLLINIASVSKNLLQVSIITGMFLLQNRAVEQHQRGAANGIAMTAMSIFKTIGPAGGGAILAWSQKRMDASFLPGVHMLFFILNIVMGLGVLLLFTPFLTIRKNIPTS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3098 427 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 422 - -
Ahy20g3098 427 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 421 IPR020846 GO:0022857
Ahy20g3098 427 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 422 - -
Ahy20g3098 427 Gene3D MFS general substrate transporter like domains 4 416 IPR036259 -
Ahy20g3098 427 SUPERFAMILY MFS general substrate transporter 17 417 IPR036259 -
Ahy20g3098 427 MobiDBLite consensus disorder prediction 185 207 - -
Ahy20g3098 427 Pfam Major Facilitator Superfamily 2 322 IPR011701 GO:0022857|GO:0055085
Ahy20g3098 427 PRINTS Tetracycline resistance protein signature 49 73 IPR001958 GO:0022857
Ahy20g3098 427 PRINTS Tetracycline resistance protein signature 106 128 IPR001958 GO:0022857
Ahy20g3098 427 PRINTS Tetracycline resistance protein signature 286 306 IPR001958 GO:0022857
Ahy20g3098 427 CDD MFS_SLC46_TetA_like 17 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3098 Ahy-Chr20 141644629 141652987 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3098 20 141644629 141652987 Ahy20g3098 20 141644629 141652987 ECH