Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3094 ATGTCTTCATTCAAATCATACGGCAAAGTTGATGAACATGACCAAATGCTACACCAAACCCAAATAAAAACCCGAAAGAGAATCATAATCATAACCCTCTCCTCAATAATCCTCGTTGCTGTTGTCCTTGCTGCTGTTTTTGGAATTCTCAATAATTCTCGTGATCATAACTCTCAACAAGATGGTAGTGGTTCAGTGCTCGCCACGTCGGTGAAGGCGATTTGCGACGTGACATTGTACAAGGAATCATGTTACAGTAGCCTGAGCTCTGTTGTGAACTCATCAGCAGGGGAGGTTAAGCCAGAGGAGCTATTAAGGTTGTCCATTAAGGTGGCCTTAGAAGAAGTGTCAAATGTTGTTAGTAGCTATTTCTCTTCTGATAGTGGGGGGCATAATGGACATTTCCAAGGCTTGAATAATGATGGTAGGGCAAAGGAGGCTTTAGACAATTGTAAAGAGCTTTTGGATCTTGGAGTTGATCATCTTAATAACTCTTTGTCTTCTGTGGATTCCTCTTCCCTTTTTGAAATCTTTGATGATCTTCAAACATGGTTAAGTGCTGCAGGTACATACCAACAAACTTGCATTGAAGGGTTTGATGAGGAAAAAGAATCACTAAAATTGAATGCAACAAACTACCTTAAAAACTCAACAGAGTTCACCAGTAACAGCCTGGCCATCATCACATGGATGAAGAAGGCGGCCGCAATGACCGTGAGCCGGCGGCGACGCCTGCTAAGTTCATCATTTCCAGAATGGGTTAGTTCCAAGGACAGGAAGTTACTTGGAAGCAAAGAAAAGAGTAATATTGTTGTGGCCAAAGATGGGAGTGGGAAATACAAGACAATATCCGAGGCATTGAAACATGTTCCAGAGAAGAGTAGTAAGAGGACAGTGATTTATGTGAAGAGAGGAGTTTACTATGAGAATGTTAGAGTTGAGAAGAACAAATGGAATGTGATGATGATTGGTGATGGCATGAATGCTACTATTGTTTCTGCTAGCCTTAACTTTGTTGATGGCACACCAACCTTTTCATCTGCTACTTTTGCTGTGTTTGGGAAGAATTTCATAGCAAGAGACATGGGATTTAGAAACACAGCTGGTCCACAGAAGCATCAAGCAGTGGCACTAATGACAACTGGGGATGAAGCTGTTTATTACAGATGCCAATTTGATGCATTTCAAGACACACTCTATGCTCATTCCAATCGCCAATTTTACAGAGAATGCAACATTTTTGGTACAGTTGATTTCATCTTTGGCAACTCTGCTGTTGTCATTCAAAATTGTAACATTTTCCCAAAGTTACCAATTCCTGGCCAGCAGAACACTATCACTGCACAAGGCAAAACTGATCCCAACATGAACACAGGTATCTCAATACAAAATTGCAAGATTTCAGGCTTTGGGAACTTGAGTTCTATCCAAACATATTTGGGAAGGCCATGGAAGGATTACTCAACAACAGTGTTCATTAGATCCAGAATGGAAGCTTTAATTAACCCAAATGGATGGTTACCTTGGGTAGGAAACTCAGCACCAGACACCATCTATTATGCTGAATTTCAGAACTATGGACCAGGGGCTTCTACAGCAAATAGAGTAAAGTGGAAGGGCTTGAGAGCTATTTCTTCTAAACAAGCTACCAAGTTTACAGTCAAGACTTTTCTTGGTGGCCAAAGATGGATTCCTGCATCTTCTGCTCCTTTTCAGTCTGATCTGTGA 1728 0.4115 MSSFKSYGKVDEHDQMLHQTQIKTRKRIIIITLSSIILVAVVLAAVFGILNNSRDHNSQQDGSGSVLATSVKAICDVTLYKESCYSSLSSVVNSSAGEVKPEELLRLSIKVALEEVSNVVSSYFSSDSGGHNGHFQGLNNDGRAKEALDNCKELLDLGVDHLNNSLSSVDSSSLFEIFDDLQTWLSAAGTYQQTCIEGFDEEKESLKLNATNYLKNSTEFTSNSLAIITWMKKAAAMTVSRRRRLLSSSFPEWVSSKDRKLLGSKEKSNIVVAKDGSGKYKTISEALKHVPEKSSKRTVIYVKRGVYYENVRVEKNKWNVMMIGDGMNATIVSASLNFVDGTPTFSSATFAVFGKNFIARDMGFRNTAGPQKHQAVALMTTGDEAVYYRCQFDAFQDTLYAHSNRQFYRECNIFGTVDFIFGNSAVVIQNCNIFPKLPIPGQQNTITAQGKTDPNMNTGISIQNCKISGFGNLSSIQTYLGRPWKDYSTTVFIRSRMEALINPNGWLPWVGNSAPDTIYYAEFQNYGPGASTANRVKWKGLRAISSKQATKFTVKTFLGGQRWIPASSAPFQSDL* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3094 575 Pfam Plant invertase/pectin methylesterase inhibitor 70 227 IPR006501 GO:0004857
Ahy20g3094 575 SUPERFAMILY Pectin lyase-like 267 572 IPR011050 -
Ahy20g3094 575 CDD PMEI-like_3 73 233 - -
Ahy20g3094 575 PANTHER PECTINESTERASE 5 573 - -
Ahy20g3094 575 Gene3D - 263 575 IPR012334 -
Ahy20g3094 575 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 231 IPR006501 GO:0004857
Ahy20g3094 575 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 232 IPR035513 -
Ahy20g3094 575 PANTHER PECTINESTERASE 5 573 - -
Ahy20g3094 575 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 231 IPR035513 -
Ahy20g3094 575 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Ahy20g3094 575 Pfam Pectinesterase 269 560 IPR000070 GO:0030599|GO:0042545
Ahy20g3094 575 SMART PMEI_2 66 227 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3094 Ahy-Chr20 141613045 141618992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3094 7 575 Carbohydrate Esterase AT3G10710 53.913 0.0 640
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3094 20 141613045 141618992 Ahy10g2533 10 114854068 114859761 hybridization