Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy20g2985 | ATGGCCAGTAATTCTTTTGTAATCCCCAATGGAAGCGGCAACGGCAATGGCATTGGAAAACTCAACCCACCGCCAAATCTGCAGAGGAACTACCAAGTGGTAGTGGCTGCTACACCAGATATGGGGATAGGTAAAGATGGGAAATTACCATGGAAGTTACCTACTGATCTCAAATTTTTTAAAGAGGTTACTGTAACAACATCTGATCCAGGGAAGAAGAATGCTGTTGTAATGGGTAGAAAAACATGGGATAGTATCCCTCTTAAATACAGGCCTCTTCCCGGCCGTCTTAATGTTGTTCTTACCCGCTCAGATAGCTTTGATATTGCAAGAGCAGAGAATGTTGTTATATGTAGAAGTATGGCTTCTGCTTTGGAATTGTTAGCTGAACCTCCCTATATTTTGTCAATTGAGAAAATATTTGTTATAGGAGGTGGACAAATATTTAGGGAGACTTTAAATGCACCTGGATGTGAAGCTATCCACATCACTGAAATTCAGACTAGCATCGAGTGTGACACATTTATGCCTCCAGTTGATTCCTCTGTATTTCAGTTGTGGTACTCATCTTTTCCTAAGGTGGAAAACAACATTCGCTATTCTTTCACAACTTATGTGCGTGTAAGGCGTTCGGTGGAGCATGCAACTCAGAATACTGATCCAGGTCTTGATAACAATTCAGATACTCTAAAGTTTGAGTTCAAGGATTTTTCTTTTCTTCCTAAAATGATTCTTGAAAGACATGAAGAATACAAGTATCTTAGGCTGGTTGAAGAAATCATTTCTGAGGGTACAGCCAAAGATGATAGGACAAGGACTGGTACCTTGTCAAAATTTGGTTGCCAGATGAGGTTCAATTTGCGCAGAAACTTCCCTCTTCTTACTACAAAGAAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATTAGTGGGTCTACAAATGCCAAGTTGCTGCAGGAAAAAGGGATCCATATATGGGATGGCAATGCATCGAGAGAATACCTAGATAGACTTGGCTTGACAGATAGGGAGGAGGGTGACTTGGGACCTGTTTATGGGTTTCAGTGGAGGCACTTTGGTGCCAGGTATACTAATATGCATGCCGACTACTCCGGCCAAGGAATTGATCAGTTGTTAGATGTTATTACCAAGATAAGGCACAATCCCAATGATCGGCGGATCATTCTCTCTGCATGGAATCCAGCTGATCTTAAATTGGCGGCCCTTCCACCGTGCCACATGTTTGCACAGTTCTATGTAGCGAATGGGGAGTTATCATGTCAAATGTATCAACGATCTGCTGACATGGGCCTAGGCGTGCCTTTTAATATTGCATCTTATGCCCTCCTGACCTGCATAATTGCTCATGTTTGTGAATTAGTTCCAGGTGATTTTATCCATGTCATTGGAGATGCACATGTTTACCAAAATCATGTGAAGCCTTTGCAGGAGCAGCTCCAGAACTTGCCACGGCCTTTTCCGACTTTGAAGATAAATCCAGAGAAAAAAGATATAGATTCTTTTGTGGCTTCTGATTTCAAGCTCAGTGACTATAATCCTCACCAGAAGATTGAGATGAAGATGGCCATCTAA | 1602 | 0.4182 | MASNSFVIPNGSGNGNGIGKLNPPPNLQRNYQVVVAATPDMGIGKDGKLPWKLPTDLKFFKEVTVTTSDPGKKNAVVMGRKTWDSIPLKYRPLPGRLNVVLTRSDSFDIARAENVVICRSMASALELLAEPPYILSIEKIFVIGGGQIFRETLNAPGCEAIHITEIQTSIECDTFMPPVDSSVFQLWYSSFPKVENNIRYSFTTYVRVRRSVEHATQNTDPGLDNNSDTLKFEFKDFSFLPKMILERHEEYKYLRLVEEIISEGTAKDDRTRTGTLSKFGCQMRFNLRRNFPLLTTKKVFWRGVVEELLWFISGSTNAKLLQEKGIHIWDGNASREYLDRLGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGIDQLLDVITKIRHNPNDRRIILSAWNPADLKLAALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCIIAHVCELVPGDFIHVIGDAHVYQNHVKPLQEQLQNLPRPFPTLKINPEKKDIDSFVASDFKLSDYNPHQKIEMKMAI* | 534 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy20g2985 | 533 | CDD | DHFR | 34 | 206 | IPR001796 | GO:0004146|GO:0046654 | |
| Ahy20g2985 | 533 | Pfam | Dihydrofolate reductase | 32 | 207 | IPR001796 | GO:0004146|GO:0046654 | |
| Ahy20g2985 | 533 | Gene3D | Thymidylate synthase/dCMP hydroxymethylase domain | 242 | 533 | IPR036926 | - | |
| Ahy20g2985 | 533 | CDD | TS_Pyrimidine_HMase | 253 | 486 | IPR023451 | - | |
| Ahy20g2985 | 533 | PRINTS | Thymidylate synthase family signature | 410 | 425 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy20g2985 | 533 | PRINTS | Thymidylate synthase family signature | 428 | 454 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy20g2985 | 533 | PRINTS | Thymidylate synthase family signature | 291 | 312 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy20g2985 | 533 | PRINTS | Thymidylate synthase family signature | 466 | 483 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy20g2985 | 533 | PRINTS | Thymidylate synthase family signature | 384 | 403 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy20g2985 | 533 | PANTHER | BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE | 1 | 533 | - | - | |
| Ahy20g2985 | 533 | TIGRFAM | thym_sym: thymidylate synthase | 252 | 533 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy20g2985 | 533 | PIRSF | DHFR-TS | 18 | 533 | IPR012262 | GO:0004146|GO:0004799|GO:0006730 | |
| Ahy20g2985 | 533 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Ahy20g2985 | 533 | ProSitePatterns | Thymidylate synthase active site. | 395 | 423 | IPR020940 | GO:0004799|GO:0006231 | |
| Ahy20g2985 | 533 | ProSiteProfiles | Dihydrofolate reductase (DHFR) domain profile. | 30 | 207 | IPR001796 | GO:0004146|GO:0046654 | |
| Ahy20g2985 | 533 | Pfam | Thymidylate synthase | 252 | 533 | IPR023451 | - | |
| Ahy20g2985 | 533 | Hamap | Thymidylate synthase [thyA]. | 250 | 533 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy20g2985 | 533 | ProSitePatterns | Dihydrofolate reductase (DHFR) domain signature. | 42 | 64 | IPR017925 | GO:0004146 | |
| Ahy20g2985 | 533 | PANTHER | THYMIDYLATE SYNTHASE 1 | 1 | 533 | IPR045097 | GO:0016741 | |
| Ahy20g2985 | 533 | SUPERFAMILY | Dihydrofolate reductase-like | 29 | 207 | IPR024072 | - | |
| Ahy20g2985 | 533 | Gene3D | Dihydrofolate Reductase, subunit A | 20 | 210 | IPR024072 | - | |
| Ahy20g2985 | 533 | SUPERFAMILY | Thymidylate synthase/dCMP hydroxymethylase | 221 | 533 | IPR036926 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy20g2985 | Ahy-Chr20 | 140575077 | 140579238 | Dispersed/Wgd |