Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2981 ATGGCTGCCGAAGCTGTTTTGTCTTCCGTTCTTAGTGTTGTTTTTGACAGGATGTCCTCCCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAGCTTACTCAGAACCTGATTGAAAGGTTGAAGACTAATCTTTATGTTGTTCGAGCCTTTCTCATCGATGCTGAGCAGAAGCAGATCAAGGAGACACCTGTCAAGGACTGGCTTCATAGTCTCAAACATGCCATGTATGTTGCTGATGACTTGCTCGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCCTCTCTCGTTTCTCTGGTATTCTCAATTTGCAAGATCGGGATGTAGCAAACAGGATGGAGGAAGTCATTGATAGGATTGAGTCTCTTGTGAATCAAAAAGACACTCTTGGTCTGAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATGTATGTGGCAGGGAAGAAGACAAGGAGGCGATAGTAAAACTGTTGTTGGATGATGATGGTGATGATACTGGTGGTCATAGTGATGTATCTGTGATTCCCATTGTGGGCATGGGTGGGATAGGAAAGACTACTTTGGCCCAATTGGTTTACCAGGATGGCAAAGTGAAGGAGAATTTTGATTTTCAAGCTTGGATTTGTGTGTCAGAAGAGTTTGATGTTTTCAAGGTCACCAAGACTATAATCGAGGCAATAACTAAAAGTTTTTGCAGCTTGACAGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAGTTGTCAAGGAAGAAGTTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTACGAAGATTGGGATAAACTTCTAAAACCTTTTCGAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACAACTAGAAGTAAAAGAGTGGCTTCTGTGGTGCAAACTGTTTCACCTTATGAACTGAGCTTATTGTCTGAGGAAGATTGTTGGTTGGTGTTTTCAAAACATGCACGACTCTCAACTGGTTCTATGGAGAATTCAACCTTGAAAAAAGTTGGCAGAGATCTTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGTTTATTGCGTGGAAATTCTGATTTCAAGGATTGGAATCATTTATTGAAGAGTGAGATCTGGGAACTCTCCGATGATAAGATAAAGGTTGTTCCTGCGTTAAGAATCAGTTATTACTATCTTCCTTCATATTTAAAGGAGTGCTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAGTTTAGCAAAGATGAATTGATATTGCTATGGATGGCAGAGAATTTTTTGCAATCAGCAGGAAAAAAAAATCCAGAAGAAGTTGGTGATGAATATTTTAAGGAATTAGTTGCGAGATCATTTTTCCAACCTCATAAGATTCATAAAAACAAGTTTGTGATGCATGATCTGGTGCATGATTTGGCAATGATGTTTGCTGGAGAATTCTATTTCAGAGCTGAAGAGCTTGAGAATGCAGTTGAGGTTGATATTAAAACTCGCCATTTGTCACATAATGCCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAGTAAAACACACAAGGACATTTCTTGGACTCAATTTGAAGCGAGAGATTCCATTTAACATGGGAAATGCACCGTGTATCTTGTTGTCAAAGTTGAAGTACCTGAGGGCTTTGTCGTTCAATTGCTTTCCTCTCAAGTCATTGCCTGATTCAATAGGCGAGTTGATTCATTTGCGTTACTTGGATTTGTCTCGGACCGACATCATGACATTGCCCGATACACTTTGCAACTTGTACAATTTACAGACATTGAAGCTGGTTCTATGTAAGAAACTAAAAGCCCTTCCTGTTGGCATGATAGATCTTACAAACTTAAGTTACCTTGATATTCGCGGGACTCCTTTGCATGAGATGCCGGAAGGCATGAGCAAATTGACAAGTTTGCAGGTTTTAAGCAACTATGTTGTCGGGAAGCGTGAAGGGAACAAGATTAATGAATTGGGAGCACTTGCAAATCTACACCAAACAATTTGGATTGACAAATTGGAGAATGTGGTCAATAGCAGCGAAGCATTGGAGGCAAGAATGTTTGAGAAGGATGGCATTGAATGTTTGCTCTTGGAGTGGTCGCCAGATGAATATGAGAATACAGTTGATTCACAAATTGAAAGAGATATACTTGAAAAGTTACAACCTCATAGTAATTTGAAACAACTAGAAATTTGGGGTTACAGGGGTACAACATTTCCAGATTGGTTGGGACATTGTTCTTACCGCAACATCACCCAAATAACACTGGGCGGTTTTTTTTCGGATTATTTCAAGAATTGTTGTATGCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTGGACATTGCAAAGTTTGAAAGGCTTGCTATTGTGGGGGCTGAGTTTTACCGAAATGATGAATCTTGTCTGGAGACTCCATTTCCAATGCTTGTAACTCTTACATTTGAGTCAATGCCTTGCTGGGAGGAATGGCGTTCGTCGGAGTTCAATGCATTTCCTCGACTTAGGAAGCTTATCATAAGGATTGTCCCATGTTGA 2619 0.4017 MAAEAVLSSVLSVVFDRMSSPEVVNWIKGKKLTQNLIERLKTNLYVVRAFLIDAEQKQIKETPVKDWLHSLKHAMYVADDLLDEVFTKAATQKDPGTFLSRFSGILNLQDRDVANRMEEVIDRIESLVNQKDTLGLREIPKENMSWRITTSLVETSDVCGREEDKEAIVKLLLDDDGDDTGGHSDVSVIPIVGMGGIGKTTLAQLVYQDGKVKENFDFQAWICVSEEFDVFKVTKTIIEAITKSFCSLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESYEDWDKLLKPFRKGVKGSKILITTRSKRVASVVQTVSPYELSLLSEEDCWLVFSKHARLSTGSMENSTLKKVGRDLVKKCDGLPLAAQALGGLLRGNSDFKDWNHLLKSEIWELSDDKIKVVPALRISYYYLPSYLKECFVYCSLYPKDYEFSKDELILLWMAENFLQSAGKKNPEEVGDEYFKELVARSFFQPHKIHKNKFVMHDLVHDLAMMFAGEFYFRAEELENAVEVDIKTRHLSHNAKGNYPISKLLGVCDRVKHTRTFLGLNLKREIPFNMGNAPCILLSKLKYLRALSFNCFPLKSLPDSIGELIHLRYLDLSRTDIMTLPDTLCNLYNLQTLKLVLCKKLKALPVGMIDLTNLSYLDIRGTPLHEMPEGMSKLTSLQVLSNYVVGKREGNKINELGALANLHQTIWIDKLENVVNSSEALEARMFEKDGIECLLLEWSPDEYENTVDSQIERDILEKLQPHSNLKQLEIWGYRGTTFPDWLGHCSYRNITQITLGGFFSDYFKNCCMLPSLGQLPSLKHLDIAKFERLAIVGAEFYRNDESCLETPFPMLVTLTFESMPCWEEWRSSEFNAFPRLRKLIIRIVPC* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2981 872 PANTHER DISEASE RESISTANCE PROTEIN RP 30 871 IPR044974 GO:0006952
Ahy20g2981 872 Gene3D - 406 492 IPR036388 -
Ahy20g2981 872 SMART LRR_typ_2 590 613 IPR003591 -
Ahy20g2981 872 SMART LRR_typ_2 637 660 IPR003591 -
Ahy20g2981 872 Pfam Rx N-terminal domain 6 95 IPR041118 -
Ahy20g2981 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 421 IPR027417 -
Ahy20g2981 872 Gene3D - 142 315 IPR027417 -
Ahy20g2981 872 PANTHER OS05G0414200 PROTEIN 30 871 - -
Ahy20g2981 872 Gene3D Ribonuclease Inhibitor 534 869 IPR032675 -
Ahy20g2981 872 SUPERFAMILY L domain-like 481 867 - -
Ahy20g2981 872 Pfam NB-ARC domain 183 387 IPR002182 GO:0043531
Ahy20g2981 872 Gene3D - 321 405 IPR042197 -
Ahy20g2981 872 Gene3D - 12 110 - -
Ahy20g2981 872 PRINTS Disease resistance protein signature 261 275 - -
Ahy20g2981 872 PRINTS Disease resistance protein signature 799 815 - -
Ahy20g2981 872 PRINTS Disease resistance protein signature 358 372 - -
Ahy20g2981 872 PRINTS Disease resistance protein signature 188 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2981 Ahy-Chr20 140558320 140563320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2981 185 667 WRKY Transcription Factor Family AT5G45050 22.509 1.04e-09 60.5