Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2980 ATGGCTGCAGAAGCTGTTTTGTCTTCCGTTCTTAGTGTTGTTTTCGACAGGATGTCCTCCCCTGAAGTTGTTAACTGGATCAAAGGGAAGAAGCTTACTCACAAGTTGATTGAAAGGTTGAAGACTAATCTTTATGCTGTTCGAGCCTTTCTCATCGATGCTGAGCAGAAGCAGATCAAGGAGACACCTGTCAAGGACTGGCTTCATAGTCTCAAACATGCCATATATGTTGCTGATGACTTGCTCGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCCTCTCTCGTTTTCTCAATTTGCAAGATCGGGATGTAGCAAACAGGATGGAGGAAGTCATTGATAGGATAGAGTCTCTTGTGATTCAAAAAGACACTCTTGGTCTCAGAGAGATTCCTAAGGAGAACATGTCATGGAGGATCACTACATCTCTAGTTGAAACATCTGATGTATGTGGCAGGGAAAAAGACAAGGAGGGCATAGTAAAACTCTTGTTGGATGATGATGGTGATGATACTGGTGGTCATAGTGATGTATCTGTGATTCCCATTGTGGGCATGGGTGGGATAGGAAAGACTACTTTGGCCCAATTGGTTTACCAGGATGGCAAAGTAAAGGAGAATTTTGATTTTCAAGCTTGGATTTGTGTGTCAGAAGAGTTTGATATTTTCAAGGTCACCAAGACTATAATCGAGGCAATAACTAAAAGTTTTTGCAGCTTGACAGATTTGAATTTGCTTCAGCATGATTTAAAAGAAAAGTTGTCAAGGAAAAAGTTCTTTGTTGTCTTGGACGATGTATGGAGTGAAAGTTACGAAGATTGGGATAAACTTCTAAAACCTTTTCGAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACAACTAGAAGTAAAAGAGTGGCTTCTGTGGTGCAAACTGTTTCCCCTTATGAACTGAGCTTATTGTCTGAGGAAGATTGTTGGTTAGTGTTTTCAAAACATGCACGTCTCCCAACTGGTTCTATGGAGAATCCAACCTTGAAAAAAGTCGGCAAAGATCTTGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCTTATTGCGTGGAAATTTTGATATCAAGTATTGGAATCATTTATTGAAGAGTGAGATCTGGGAACTCTCCGATGATAAGATAAAGGTTGTTCCTGCGTTAAGAATCAGTTATTACTATCTTCCTTCGTATTTAAAGGAGTGCTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAATTTAGCAAAGATGAATTGATATTGCTATGGATGGCAGAGAATTTTTTGCAACCAGCAGGAAAAAAGACTCCAGAAGAAGTTGGTGATGAATATTTTGATGAATTGATTGCGAGATCATTTTTCCAACCTCATAAGATTTATGAAAAGAACTTTGTGATGCATGATATGGTGCATGATTTGGCAATGATGTTTGCTGGAGAATTCTATTTCAGAGCTGAAGAGCTTGAGAATGCAGTTGAGGTTGATATTAAAACTCGTCATTTGTCACATAATGCCAAAGGCAATTATCCAATCTCAAAACTTTTGGGAGTTTGTGACCGAGTAAAACACACAAGGACATTTCTTGGACTCAATTTGAATTCACAGATTCCATTTAACATGGAAAACGCACCTTGTATCTTGTTGTCAAAGTTGAAGTACCTGAGGGCTTTGTCGTTCAGTTGCTTTCCTCTTGAGTCATTGCCTGATTCAATAGGCGAGTTGATTCATTTGCGTTACTTGGATTTGTCTTGGACAGACATCATGACATTGCCCGATACACTTTGCAACTTGTACAATTTACAGACATTGAAGCTGTTTGGATGTGAGAAACTAAAAGCCCTTCCTGCTGGCATGAAAGATCTTACAAATTTGCGTTACCTTGATATTAGCTTCACTGGTTTGCATGAGATGCCGGAAGGCATGAGCAAATTGACAAGTTTGCAGGTTTTAAGCAACTATGTTGTTGGGAAGCGTGAAGGGAACAAGATTAATGAATTGGGAGCACTTGCAAATCTACACCAAACAATTTTGATTGACAAATTGGAGAATGTGGTCGATAGCAGCGAAGCGTTGGAAGCAAGAATGTTTGATAAGGATGGCATTGAATCTTTGTTCTTGAACTGGTCGCCAGATGAATATGAGAATACCATTGATTCCCAAATTGAAAGAGATATACTTGAAAAGTTACGACCTCATAGTAATTTGAAACATCTACAAATTAGGGGTTACAGGGGTACAACATTTCCAGATTGGTTGGGACATTGTTCTTACCACAACATCACCCAAATAACACTGGGCGGTCTTCTTTCGGGTTATTTCAAGAATTGTTGTATGCTTCCTTCACTTGGACGGTTGCCATCTTTGAAGCGCCTGGAAATTTCAAAGTTTGAAAGGCTTGCTATTGTGGGTGCTGAGTTTTACCGAAACGATGAATCTTGTCTGGAGACTCCATTTCCAATGCTTGAAACTCTTCAATTTGCGTCAATGCCTTGCTGGGAGGAATGGCCTTCATTGGAGTTCAATGCATTTCCTCGACTTAGGGAGCTTAGCCTAAGGGATTGTCCCATGTTGAGAGGAGATTTGCCAAATCAATTACCATCTTTGCAATCACTTCATATTATGCATTGCAAGCAGCTCAGTTGTTGTGTTCCAAGAGCTCCTGTGATTACCTCTTTAGGCATAGAAGGAAGAAATGAAGTGAGAATTGGGGAGCTACCTCCTTTGCTGGATATTCTATCAATTACTGGAAAGCATCAAGTGGAGTCGGTGATGGAGGCCATTGCACACACCCAACTCACTTGCCTCACATCTTTATGCATCTCAGGTTGTTCATCCCGCGTATTGTTTCCAGTTAGTAGTATTCCCGCTTCGCTACAAGAGCTGAGGATATTGGATTGCAAAAAATTAGAATTCCAAATGGAAGGCCAACACCACTCATTGCATAATCTAAGGATGCATAACAGCTGTGATTCGGTTACATCCTTCTCGCTGGATTCCTTTCCAAATCTCGTGCGTGTTTATATAAGCGAGTTTGAAAAGATGGAGTCTCTGTTGGTGTCACGCTCTCTTTCATGTCTCCGTTCTTTATATATAAAGAATTGTGGGAGTTTGAAATCCCTGCAGACGCTATGGATGGCATCACCTCAGCTAGAACATCTCACATTACTTGGTTGCCCAGAGATTGAATTGTGTGCTACGGGGGATCCACAGCGTAGCTTGAGATCTCTTACCATCAGCTACTGCGAGAAACAACTCAGCTGTGTAGCATCGCAATTTCATGGGCTTACTCATCTTTGGATTGAAGGTAAATGTGAGAGTGTGAAGTGTCTCCCCAAGGAAGGTTGGTTGCCTGCCACCCTTGAGTCTCTCTCTCTGATGAGCATTGAAAGTGTGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACAATTGTCTATTTATAAATGTTACAATTTGGAGAACATTGACGGAGAGAAGCTGCCTGCCTCTCTTTTACGACTCAGCATCTCTAAAAGCCCTTTGGGTAAACGGTGTGAGATGAAGGACCCGCAGGTTTGGCCGAAAATTTCCCACATCCCCGCCATTCAAGTTGATGACAGATGGATTTGGTAA 3663 0.4128 MAAEAVLSSVLSVVFDRMSSPEVVNWIKGKKLTHKLIERLKTNLYAVRAFLIDAEQKQIKETPVKDWLHSLKHAIYVADDLLDEVFTKAATQKDPGTFLSRFLNLQDRDVANRMEEVIDRIESLVIQKDTLGLREIPKENMSWRITTSLVETSDVCGREKDKEGIVKLLLDDDGDDTGGHSDVSVIPIVGMGGIGKTTLAQLVYQDGKVKENFDFQAWICVSEEFDIFKVTKTIIEAITKSFCSLTDLNLLQHDLKEKLSRKKFFVVLDDVWSESYEDWDKLLKPFRKGVKGSKILITTRSKRVASVVQTVSPYELSLLSEEDCWLVFSKHARLPTGSMENPTLKKVGKDLVKKCDGLPLAAQALGGLLRGNFDIKYWNHLLKSEIWELSDDKIKVVPALRISYYYLPSYLKECFVYCSLYPKDYEFSKDELILLWMAENFLQPAGKKTPEEVGDEYFDELIARSFFQPHKIYEKNFVMHDMVHDLAMMFAGEFYFRAEELENAVEVDIKTRHLSHNAKGNYPISKLLGVCDRVKHTRTFLGLNLNSQIPFNMENAPCILLSKLKYLRALSFSCFPLESLPDSIGELIHLRYLDLSWTDIMTLPDTLCNLYNLQTLKLFGCEKLKALPAGMKDLTNLRYLDISFTGLHEMPEGMSKLTSLQVLSNYVVGKREGNKINELGALANLHQTILIDKLENVVDSSEALEARMFDKDGIESLFLNWSPDEYENTIDSQIERDILEKLRPHSNLKHLQIRGYRGTTFPDWLGHCSYHNITQITLGGLLSGYFKNCCMLPSLGRLPSLKRLEISKFERLAIVGAEFYRNDESCLETPFPMLETLQFASMPCWEEWPSLEFNAFPRLRELSLRDCPMLRGDLPNQLPSLQSLHIMHCKQLSCCVPRAPVITSLGIEGRNEVRIGELPPLLDILSITGKHQVESVMEAIAHTQLTCLTSLCISGCSSRVLFPVSSIPASLQELRILDCKKLEFQMEGQHHSLHNLRMHNSCDSVTSFSLDSFPNLVRVYISEFEKMESLLVSRSLSCLRSLYIKNCGSLKSLQTLWMASPQLEHLTLLGCPEIELCATGDPQRSLRSLTISYCEKQLSCVASQFHGLTHLWIEGKCESVKCLPKEGWLPATLESLSLMSIESVEMLECKGLAHLTSLQQLSIYKCYNLENIDGEKLPASLLRLSISKSPLGKRCEMKDPQVWPKISHIPAIQVDDRWIW* 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2980 1220 SUPERFAMILY L domain-like 478 897 - -
Ahy20g2980 1220 Gene3D - 140 312 IPR027417 -
Ahy20g2980 1220 Gene3D Ribonuclease Inhibitor 529 911 IPR032675 -
Ahy20g2980 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 418 IPR027417 -
Ahy20g2980 1220 Gene3D - 318 402 IPR042197 -
Ahy20g2980 1220 SMART LRR_typ_2 634 657 IPR003591 -
Ahy20g2980 1220 SMART LRR_typ_2 1050 1071 IPR003591 -
Ahy20g2980 1220 SMART LRR_typ_2 587 610 IPR003591 -
Ahy20g2980 1220 Gene3D Ribonuclease Inhibitor 913 1203 IPR032675 -
Ahy20g2980 1220 Gene3D - 403 489 IPR036388 -
Ahy20g2980 1220 Pfam Rx N-terminal domain 6 95 IPR041118 -
Ahy20g2980 1220 Pfam NB-ARC domain 181 384 IPR002182 GO:0043531
Ahy20g2980 1220 Gene3D - 22 125 - -
Ahy20g2980 1220 PANTHER DISEASE RESISTANCE PROTEIN RP 30 960 IPR044974 GO:0006952
Ahy20g2980 1220 SUPERFAMILY RNI-like 834 1193 - -
Ahy20g2980 1220 PRINTS Disease resistance protein signature 355 369 - -
Ahy20g2980 1220 PRINTS Disease resistance protein signature 258 272 - -
Ahy20g2980 1220 PRINTS Disease resistance protein signature 185 200 - -
Ahy20g2980 1220 PRINTS Disease resistance protein signature 876 892 - -
Ahy20g2980 1220 PANTHER OS05G0414200 PROTEIN 30 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2980 Ahy-Chr20 140540279 140546365 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2980 182 668 WRKY Transcription Factor Family AT5G45050 21.670 7.70e-10 61.6