Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2447 ATGCCCTCCTCCGACTCCGGTGAAAGCCGTCGATCAGCCAAGCCTCAAAACACTTCCCTAGCCCCACCGCCGGCCGAGCAAGAGCACCTGCCATGCCCTCCCTGCGACTCTACTAATACCAAGTTCTGCTACTACAACAACTACAACTTCTCCCAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCAGCACTCTCCGTGACATCCCCGTCGGCGGTGGAAGCCGTAAAAACGCCAAGTGCTCTCGCACCGTTCCTTTAGCCTCCACCGCCACAACCTCCTCCTCCGCGGGTGTGGCCGTCACCTCGGTTTCTTCTGTGACCGTGGCCGGGAACAACCACCCCGGAGCACCCGTGCAGTTCGGTGGGAGCTTCACTTCGTTGCTGAGCAACACACAACAGGGTCCTGGTGGGTTTCTGGCTCTGGGTGGGTTCGGGCTTGGTCTTGGGCCTGGCCTCGAAGTTGTTGGATTTGGGATGGGGATGGGGAGAGGCGGTTGGGCTTTCCCGGGCGTGGTGGCAGACGGAGGCAGCATTGGCGGCGGTGTTGCGGGCTCCGGTGTTGGGCACACGTGGGGTGAGGGGGAGTGGGGTTACGGGAGTGGGGTGACGGGAGTGGGGTGA 636 0.6289 MPSSDSGESRRSAKPQNTSLAPPPAEQEHLPCPPCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGSTLRDIPVGGGSRKNAKCSRTVPLASTATTSSSAGVAVTSVSSVTVAGNNHPGAPVQFGGSFTSLLSNTQQGPGGFLALGGFGLGLGPGLEVVGFGMGMGRGGWAFPGVVADGGSIGGGVAGSGVGHTWGEGEWGYGSGVTGVG* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2447 211 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Ahy20g2447 211 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Ahy20g2447 211 MobiDBLite consensus disorder prediction 1 31 - -
Ahy20g2447 211 MobiDBLite consensus disorder prediction 1 23 - -
Ahy20g2447 211 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 199 - -
Ahy20g2447 211 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 199 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2447 Ahy-Chr20 130374109 130374755 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2447 1 135 C2C2-Dof Transcription Factor Family AT3G50410 52.903 5.34e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy20g2447 zf-Dof 2.70E-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2447 - - ahf:112786370 348.206