Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0991 ATGTCTCCCACAACTCCCTCCCTTCTCGACACCCTCCTCTGCCAAGAAGAACACGACGACACCTTTGACGACACCCAAAACGACGCGTCGTTCCACCTCAACGACAACCACCACGACGAATCACCGTCGTTTTGCCCCGCAAAGCTCCAATCTTTTCCTCATCCCGTTCTGCATGACAACGACCTGTTCTGGGAACACGACGAGCTCGCCTCCTTAATCTCCAAAGAGGAAGAGACCCACGCCGCCGCTGGTAACGACGACGACCACCGTGGACTTCTAGATGGGCTTCGAGTTGGGCCCGTTGGCTGGATCACTAACGTGTGTGCGCACTATGGGTTTTCAGCTTTGACCACCGTTCTCGCCGTTAACTACTTCGACAGGTTCGTCACGAGCCTCACGTTTCAAAGGGATAAGCCATGGATGACTCAGTTAACGGCGGTTGCGTGCTTGTCAATCGCTGCAAAGATGGAAGAGACACATGTGCCCCTCCTCTTAGACCTCCAAGTGGAAGAATCGAGGTTTGTGTTTGAAGCAAAGACAATACAAAGAATGGAGCTTCTTGTGTTGTCTACTCTCAAATGGAAGATGCATCCGGTGACCCCAATTTCTTTTTTTGAACACATTGTAAGAAGGCTTGGCCTCAAGAGTCGCTTGCATTGGGAATTTCTATGGCGGTGCCAGCGGGTTCTTCTTGGCGTCATTGCCGATTCAAGGGTTATGAGTTATCTTCCATCTACATTGGCTGCTGCTACGATGATCCATGTTATTAAAGAGATTGAGCCATTTAATGCAACTAAGTACATTAGTGAACTTCTGGGACTACTCAAGATTAGTGAGGAACAAGGGAACCAGTGCTACAAACTCTTGCTGAAATCATTAGTTTGTGAAGAAGGTATTACTGACGGTCTTCACCAGATGCACAAGCGCAAGCGCAAGCGCGAATCTGCCCCGAGTAGCCCGGGAGGTGTCATTGATGCTTCTTTCAGTTGTGATAGCTCAAACGATTTGTGGGCCGTTGCGGCATCGTCGGTTTCACATTCGATGGAGCCGCTGTTTAAGAGGAGCAGAGCTAAGGACCAGCAGATGAGACTGCCTTCTGTTAGTCGCGTGTCTATCGATGTTCTTAATAGCCCTCATTAA 1140 0.4956 MSPTTPSLLDTLLCQEEHDDTFDDTQNDASFHLNDNHHDESPSFCPAKLQSFPHPVLHDNDLFWEHDELASLISKEEETHAAAGNDDDHRGLLDGLRVGPVGWITNVCAHYGFSALTTVLAVNYFDRFVTSLTFQRDKPWMTQLTAVACLSIAAKMEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWKMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCQRVLLGVIADSRVMSYLPSTLAAATMIHVIKEIEPFNATKYISELLGLLKISEEQGNQCYKLLLKSLVCEEGITDGLHQMHKRKRKRESAPSSPGGVIDASFSCDSSNDLWAVAASSVSHSMEPLFKRSRAKDQQMRLPSVSRVSIDVLNSPH* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0991 379 SUPERFAMILY Cyclin-like 63 197 IPR036915 -
Ahy1g0991 379 Pfam Cyclin, N-terminal domain 72 196 IPR006671 -
Ahy1g0991 379 PANTHER CYCLINS 39 363 IPR039361 -
Ahy1g0991 379 Gene3D - 198 287 - -
Ahy1g0991 379 CDD CYCLIN 96 189 IPR013763 -
Ahy1g0991 379 SMART cyclin_7 102 190 IPR013763 -
Ahy1g0991 379 PANTHER CYCLIN-D3-2 39 363 - -
Ahy1g0991 379 Pfam Cyclin, C-terminal domain 199 297 IPR004367 -
Ahy1g0991 379 Gene3D - 95 197 - -
Ahy1g0991 379 SMART Cyclin_C_2 199 321 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0991 Ahy-Chr1 17057546 17059575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g0991 61 369 Core Cell Cycle Gene Families AT5G67260 50.955 3.79e-101 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0990 11 21778015 21780076 Ahy1g0991 1 17057546 17059575 hybridization
Ahy1g0991 1 17057546 17059575 Ahy5g0604 5 7705357 7707861 PCT