Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3277 ATGGGTCGCTCCCATGTCCTCCTCCTCTTGCTCTCCCTTCTGGCGGCGGCCGTCGTGGCGTCAGCACTCGACATGTCGATCATCGACTACGACGCGAAGTTAGAAGCCATGACGGAGAGCCACCTCATGAACCTCTACGAGTCATGGCTGGTGAAGCATGGCAAGGTCTACAACGCGTTGGGAGAGAAAGAGAGAAGGTTCGAGATCTTCAAGGATAACCTGCGGTTCATTCACGAACATAACAGCGCTGGGAACAAACCCTACAAGCTTGGCTTGAACAAGTTCGCCGATCTCACCAATGAAGAGTACAGAGCCAGGTACCTCGGCACCAAACCCCGCAGCTCCTCCGAGCAACAGCGATTGCTCTCTGGCAACAGGAAGAGTGACCGTTACGCATTCCGCGCCGGCGACGAGTTGCCTGCTTCTGTTGATTGGAGGGAGAAGGGTGCCGTCTCCCCCGCTAAGGATCAAGGCCAATGCGGGAGTTGTTGGGCTTTCTCGACGGTTGCTGCGGTGGAAGGGATCAATAAAATTGTGACGGGGGAGCTGATATCTCTGTCAGAGCAAGAGTTGGTGGATTGTGATAGGAGCTTCAACATGGGATGCAATGGAGGCCTCATGGACAATGCATTCGACTTCATTCTCAACAATGGAGGCATTGATTCTGAGCAAGATTACTCCTACCATGCTCGTGAAGGTGTTTGTGATACCAATAGGAAAAATGCTCATGTAGTTACCATAGATGGTTATGAAGATGTGCCAGAAAATGATGAGAAGGCGTTGGCTAAGGCTGTTGCACACCAACCTGTTAGTGTTGCCATTGAAGCTGGTGGCAGGGCCTTCCAACTTTATCAATCTGGTATCTTCACCGGCATATGTGGAACTGAACTTGACCACGGTGTTGCCGCAGTTGGGTACGGAACAGAAGACGGTAAAGACTACTGGTTGGTGAGGAATTCATGGGGTTCAGGATGGGGAGAGGAGGGTTACATCAAGCTGGAGAGAAATCTTGCACATGGCAGAACCGGAAAGTGTGGTATCGCAATGGAGGCATCATATCCAATCAAGAACAGCACCAACCCACCAAACCCTGGTCCCTCACCTCCATCCCCAGTCAACCCTTCCACTGTCTGTGACGAATACTACTCTTGCCCTTCTCGCACCACTTGCTGCTGCGTCTTCGAGTATGCAGGATTTTGCTTTGGATGGGGATGCTGCCCTATGCAATCCGCCACTTGCTGCGACGACGGTGCTAGCTGCTGTCCTCCTGAGTTTCCCGTCTGCGACACTCGCGCCGGAACCTGCAGATTGAGTAAAGATAACCCATTCGGAGTGAATTCCTTGCCACGAACACGTGCTACAAGCACTTGGACTCAAAGGAAAGTTGCCATGAAAGACTGCTTATTGGCATGA 1413 0.5195 MGRSHVLLLLLSLLAAAVVASALDMSIIDYDAKLEAMTESHLMNLYESWLVKHGKVYNALGEKERRFEIFKDNLRFIHEHNSAGNKPYKLGLNKFADLTNEEYRARYLGTKPRSSSEQQRLLSGNRKSDRYAFRAGDELPASVDWREKGAVSPAKDQGQCGSCWAFSTVAAVEGINKIVTGELISLSEQELVDCDRSFNMGCNGGLMDNAFDFILNNGGIDSEQDYSYHAREGVCDTNRKNAHVVTIDGYEDVPENDEKALAKAVAHQPVSVAIEAGGRAFQLYQSGIFTGICGTELDHGVAAVGYGTEDGKDYWLVRNSWGSGWGEEGYIKLERNLAHGRTGKCGIAMEASYPIKNSTNPPNPGPSPPSPVNPSTVCDEYYSCPSRTTCCCVFEYAGFCFGWGCCPMQSATCCDDGASCCPPEFPVCDTRAGTCRLSKDNPFGVNSLPRTRATSTWTQRKVAMKDCLLA* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3277 470 SMART pept_c1 139 355 IPR000668 GO:0006508|GO:0008234
Ahy19g3277 470 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Ahy19g3277 470 SUPERFAMILY Cysteine proteinases 38 355 IPR038765 -
Ahy19g3277 470 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Ahy19g3277 470 Gene3D Granulin 375 437 IPR037277 -
Ahy19g3277 470 SMART Inhibitor_I29_2 46 103 IPR013201 -
Ahy19g3277 470 Gene3D Cysteine proteinases 24 357 - -
Ahy19g3277 470 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 33 385 - -
Ahy19g3277 470 Pfam Cathepsin propeptide inhibitor domain (I29) 46 103 IPR013201 -
Ahy19g3277 470 SUPERFAMILY Granulin repeat 376 408 - -
Ahy19g3277 470 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
Ahy19g3277 470 Pfam Granulin 389 435 IPR000118 -
Ahy19g3277 470 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Ahy19g3277 470 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Ahy19g3277 470 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
Ahy19g3277 470 CDD Peptidase_C1A 140 354 IPR039417 -
Ahy19g3277 470 Pfam Papain family cysteine protease 139 355 IPR000668 GO:0006508|GO:0008234
Ahy19g3277 470 SMART GRAN_2 378 435 IPR000118 -
Ahy19g3277 470 PANTHER CYSTEINE PROTEASE 33 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3277 Ahy-Chr19 155870831 155873326 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3277 19 155870831 155873326 Ahy19g3277 19 155870831 155873326 ECH
Ahy19g3277 19 155870831 155873326 Ahy11g0985 11 21507498 21511298 ECH
Ahy16g3497 16 152390159 152394384 Ahy19g3277 19 155870831 155873326 ECH