Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3270 ATGGGTGCTCTTGATTTCCTTTCAGATTACTTCTCAGTGACGAGGACCCCAAGAAAGAAACGGAAGCCAATGCAGACGGTGGAAATAAAGGTGAAGATGGACTGTGATGGGTGTGAGAGGAGAGTAAGAAACTCAGTTGCAAACATGAAAGGAGTGAAACAAGTGGAGGTGAATAGGAAACAGAGCAAGGTAACAGTGACAGGGTATGTGGATAGAAACAGGGTTCTGAAGAAAGTGCAGAGCACAGGGAAGAGAGCAGAGTTCTGGCCATACATTCAATATAACTTGGTTGCATACCCTTTTATTTCTCAAGCTTATGACAAGAAGGCTCCTTCTGGTTATGTCAAGAACACTGATCTCGCCCTCCCTAACCCCAATGCTCCCCATGAGAAGCTTGCTACTCTCTTCAGTGATGATAATCCTAATTCCTGTTCCATCATGTAA 444 0.4437 MGALDFLSDYFSVTRTPRKKRKPMQTVEIKVKMDCDGCERRVRNSVANMKGVKQVEVNRKQSKVTVTGYVDRNRVLKKVQSTGKRAEFWPYIQYNLVAYPFISQAYDKKAPSGYVKNTDLALPNPNAPHEKLATLFSDDNPNSCSIM* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3270 147 SUPERFAMILY HMA, heavy metal-associated domain 23 90 IPR036163 GO:0046872
Ahy19g3270 147 ProSiteProfiles Heavy-metal-associated domain profile. 33 88 IPR006121 GO:0046872
Ahy19g3270 147 Gene3D - 12 90 - -
Ahy19g3270 147 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 147 IPR045181 GO:0046872
Ahy19g3270 147 CDD HMA 28 87 IPR006121 GO:0046872
Ahy19g3270 147 Pfam Heavy-metal-associated domain 30 84 IPR006121 GO:0046872
Ahy19g3270 147 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3270 Ahy-Chr19 155808931 155809589 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3270 19 155808931 155809589 Ahy19g3270 19 155808931 155809589 ECH
Ahy19g3270 19 155808931 155809589 Ahy9g2368 9 112532477 112533179 hybridization