Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3264 ATGGTGGCTTTTGGCGGTAAAAAGATGCGCCAAATGGTTGTTGGCTTCGGTGGAAGTGGCATCGGCCAGGTCGTTGCCGCCGTCACCGTTTCCTTCCTCCTCCGCCTCTTCACTTCTCCCGGTCCCGCACTCCCTCCGGACGATGAAGATAATGACGGCGGCTACGATGTGCCGGAGAACGGCATCCACGACGCGGAAGCTCCGCCGTCCGGAAAGGTTACGCCGGTTACAATCCGATGGAACAACATCAATTGCTCCCTTTCCGATAAATCGTCCAAGTCCGTGAGGATTTTGCTGAAAAATGTGAGTGGAGAAGCAAAACCTGGAAGGTTGCTAGCTATAATGGGGCCTTCGGGTTCAGGGAAGACAACTCTGCTTAATGTTCTTGCAGGCCAGTTGGCAGCATCGCCTCGGTTGCATTTGTCAGGCCGTTTGGAGTTCAATGGAAAGCCTAGTTCAAGGAACACTTACAAGTTTGCTTATGTGAGGCAGGAGGATCTCTTCTTCTCACAACTCACTGTTCGGGAAACATTGTCTCTTGCTATAGAACTCCAGCTTCCCCACATTTCATCTGCAGAAGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAACTAGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATGCGAAAGTTCGTGGAATCAGTGGTGGTGAAAAGAAACGCTTATCCTTGGCATGTGAATTACTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAAGCTGAGAAAGTCGTGGAAACTCTTCAACAACTTGCCCAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTACAGTAAATTCGATGACATTGTCTTGCTAACAGAGGGTTCACTTGTGTATGCTGGTCCTGCCCATGATGAACCGTTGGCATACTTCTCAAAATTTGGGTACCACTGCCCTGATCATGTGAATCCTGCTGAATTTTTGGCTGATCTTATATCTGTAGACTACAGTTCTGCTGATAGTGTTTATTCCTCTCGAAAAAGGATCGATGGTCTTGTCGAGTCATTCTTGCAAAGGCTATCTACATCTTTTATAATATATGCAACTCCAATTACTGTAGATGAGCTCTCAAAAAGTAGAAAGAAAATCAGTAGGAGGACTATTGTGCAGAAGAAAGGAGGTTGGTGGAAGCAATTTTGGTTGCTTCTTAGGCGAGCATGGATGCAGGCTTCCCGAGATGTACCAACAAACAAAGTTCGAGCAAGGATGTCAATAGCATCAGCAATTATCTTCGGTTCAGTTTTCTGGAGAATGGGAAATTCCCAGACTTCAATACAAGACAGAATGGGATTACTTCAGGTAGCCGCAATAAATACAGCTATGGCAGCTCTCACAAAGACTGTTGGTGTATTTCCAAAGGAACGTGCCATTGTTGATAGAGAACGTGCAAAAGGCTCCTATTCTTTGGGTCCCTATCTGTTCTCAAAATTGTTAGCAGAGATTCCGATTGGAGCCTCATTTCCATTGATGTTTGGTGCTGTTTTATACCCAATGGCTCGTCTTCATCCTACTTTGCTCAGATTTGGGAAGTTCTGTGGAATTGTCACCATGGAGTCTTTTGCTGCATCTGCAATGGGTCTCACTGTTGGTGCTATGGTTCCAACCACCGAAGCTGCAATGGCGGTAGGCCCATCTCTTATGACAGTTTTTATTGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCCATCATCTTCCGTTGGATTCCCAGCGTTTCTCTAATTAGATGGGCCTTCCAAGGACTTTGCATCAATGAATTTAGCGGTCTTCAATTTGAGCATCAGAATTCTTTTGACATTCAAACTGGAGAACAGGCACTTGAGCGCCTTTCCTTTGGAAAAAGTAGGATTAGTGATACAGTGTTAGCACAAAATAGAATACTGTTCTTCTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCTAAATACCAGCAACTTGAGCCAATCCCACTTGAACAAAACAAAACACACTTCAAACTCGAGGAATTAAACCCTGAACAAGTTGATCAGACACTTGAATCTCAACCTGTCAGCCAAGATGGATCCAACCAGCCTCTTGAGTCACCTGAAGTGGATCCTATTGGTCCATTTGTCTTAGAAGGTACTAAGTAA 2199 0.4493 MVAFGGKKMRQMVVGFGGSGIGQVVAAVTVSFLLRLFTSPGPALPPDDEDNDGGYDVPENGIHDAEAPPSGKVTPVTIRWNNINCSLSDKSSKSVRILLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGRLEFNGKPSSRNTYKFAYVRQEDLFFSQLTVRETLSLAIELQLPHISSAEERDEYVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPAHDEPLAYFSKFGYHCPDHVNPAEFLADLISVDYSSADSVYSSRKRIDGLVESFLQRLSTSFIIYATPITVDELSKSRKKISRRTIVQKKGGWWKQFWLLLRRAWMQASRDVPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGASFPLMFGAVLYPMARLHPTLLRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFSGLQFEHQNSFDIQTGEQALERLSFGKSRISDTVLAQNRILFFWYCTTYLLLEKNKPKYQQLEPIPLEQNKTHFKLEELNPEQVDQTLESQPVSQDGSNQPLESPEVDPIGPFVLEGTK* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3264 732 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524
Ahy19g3264 732 MobiDBLite consensus disorder prediction 696 715 - -
Ahy19g3264 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 310 IPR027417 -
Ahy19g3264 732 MobiDBLite consensus disorder prediction 43 73 - -
Ahy19g3264 732 CDD ABCG_EPDR 75 306 - -
Ahy19g3264 732 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Ahy19g3264 732 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 681 - -
Ahy19g3264 732 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 681 - -
Ahy19g3264 732 Gene3D - 71 314 IPR027417 -
Ahy19g3264 732 MobiDBLite consensus disorder prediction 691 732 - -
Ahy19g3264 732 Pfam ABC-2 type transporter 281 338 IPR043926 GO:0140359
Ahy19g3264 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 324 IPR003439 GO:0005524
Ahy19g3264 732 Pfam ABC-2 type transporter 403 613 IPR013525 GO:0016020|GO:0140359
Ahy19g3264 732 SMART AAA_5 108 301 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3264 Ahy-Chr19 155758638 155764652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3264 84 318 Calmodulin-binding Proteins AT2G36910 28.980 2.30e-12 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3264 19 155758638 155764652 Ahy19g3264 19 155758638 155764652 ECH
Ahy19g3264 19 155758638 155764652 Ahy9g2372 9 112572348 112578404 hybridization