Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3247 ATGATGTCATTCTCTCTCTTACACTCCCCACATTCCCTAAACCTTAACCTACACCCCCATGCGCACTTTAGCCAACCCTCTCCCTTTCCTATGTCCATCTTACGCCGCCTCACCCTAACCCTACGCCCTCGCCTCCACCACAATCGCCATCGCCGCACCGCCACCACATGCGCCGCTGTCCGCCAGGACACCACCCTCTGGACCCCGGCTCCGCTCTCTGAGGTGGAACCCGCCGCCGAGTCCCTCTTCCACATCGCCGTTGACATCTCCGCCACGCCCGATCTCGTGGAGTCACACACACGCGCCGGTCAGTACCTTCAGCTACGTGTTCCCGACGCGCCCAAGCCCGTGTTCCTTGCCATCGCATCGCCGCCGAAGCTGGCATCTGCGCGTGGCGCGTTCGAGTTCTTGGTGAAGAGCGTGAAGGGGTCCACTGCGGAGGCGCTGTGCGCGTTGAAGAGAGGGGATGTGGTGGAGCTGAGCTCGGTCATGGGAAATGGGTTTGACATCAGCCGGATCGACCCGCCGGAGAAATTCGGCACTGTCATCGTCTTTGCCACCGGTTCCGGAATTAGCCCAATTCGATCGCTTGTCGAGTCAGGATTTGGCGCTGCTCAAAGGTCTGATGTAAGGCTATATTATGGGGCAAGAAACCTTCAGAGAATGGCTTATCAGGATAGATTTAAGGAATGGGAATCTTCTGGTGTGAAGATTGTGCCTGTGTTATCTCAACCAGATGATAGTTGGAGTGGGGAGAGAGGCTATGTACAGGAGGCATTTAAAAAAGTGAAGCAAATATCAAACCCTTTATCAACTGGTGCAGTACTTTGTGGCCAGAAAGAGATGACTGAGGAAGTGACATCTATTCTCGTTGCGGATGGAGTCTCAGGTGAGAAGATATTGAAGAACTTTTGA 915 0.5464 MMSFSLLHSPHSLNLNLHPHAHFSQPSPFPMSILRRLTLTLRPRLHHNRHRRTATTCAAVRQDTTLWTPAPLSEVEPAAESLFHIAVDISATPDLVESHTRAGQYLQLRVPDAPKPVFLAIASPPKLASARGAFEFLVKSVKGSTAEALCALKRGDVVELSSVMGNGFDISRIDPPEKFGTVIVFATGSGISPIRSLVESGFGAAQRSDVRLYYGARNLQRMAYQDRFKEWESSGVKIVPVLSQPDDSWSGERGYVQEAFKKVKQISNPLSTGAVLCGQKEMTEEVTSILVADGVSGEKILKNF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3247 304 Gene3D Translation factors 60 165 - -
Ahy19g3247 304 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 176 301 IPR039261 -
Ahy19g3247 304 PANTHER F9L1.8 PROTEIN 4 304 - -
Ahy19g3247 304 SUPERFAMILY Riboflavin synthase domain-like 62 168 IPR017938 -
Ahy19g3247 304 PANTHER - 4 304 - -
Ahy19g3247 304 CDD FNR_like 73 301 - -
Ahy19g3247 304 Gene3D - 179 304 IPR039261 -
Ahy19g3247 304 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 65 170 IPR017927 GO:0016491
Ahy19g3247 304 Pfam Oxidoreductase NAD-binding domain 186 286 IPR001433 GO:0016491
Ahy19g3247 304 PRINTS Phenol hydroxylase reductase family signature 183 202 - -
Ahy19g3247 304 PRINTS Phenol hydroxylase reductase family signature 208 217 - -
Ahy19g3247 304 PRINTS Phenol hydroxylase reductase family signature 100 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3247 Ahy-Chr19 155637350 155639428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3247 103 298 NADPH P450 reductases AT5G17770 25.714 2.97e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3247 19 155637350 155639428 Ahy19g3247 19 155637350 155639428 ECH
Ahy19g3247 19 155637350 155639428 Ahy9g2394 9 112764331 112766422 hybridization