Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3239 ATGGAGATGAAGGGGGAGAATCACAAAGAGAAGGCGTTGAATCTGCTTCGAAGCAGAGTCTGTGACCCCAAATTCGCGTTCAAGGCACTCTATGATTCTCCAGAGAGCAACTATAGCAAGCTTAAATTCATGATTTCTAGTTCCGTTACTGAGGCTTGCAACAATTCCATTCTCCTTCTCGGTCCTCGCGGCTCCGGCAAGATTTCCGTGTTGGAGCTTGTCATTCGGGATTTGCTGGATGAATATCCCGAGTCAATTTCAGTGATCAGGTTAAGTGGACTTCTACATAGCGATGACATTTCAGCATTCAAGGAAATAGCTAGGCAGTTATGTATGGAGCATCAGTTACTATTCTCAAAATCGGCATCGTTTGATGACAACTCCCAATTTATGGTAGCAATGCTAAAGGAATGTGGATTAGCACATAAAACAGTCATTTTTGTTTTGGATGAGTTTGACCTCTTTGCTCAGGGCAAACAGCGGTTACTTTATAGCCTCTTGGATGCAATGCAATCAGTAACATCACAGGCTGTTGTAGTTGGCATTAGCTGTCGGCTGGATGCTGATCAGCTGTTGGAGAAAAGAGTACGATCTCGATTTTCACATAGAAAGCTGTTGTTTACTCCGCCTTCAATGGAAGACTCACAGAGCTTGCTGGTGCACATGCTTACAATACCAGTAGATTCAAGCTTTCCCCGTGATTATGCTATTGAATTTAATAGAAAGGTCCAAAATATTGTAGAAGACAAAAGGTTCAAAGAAACCTTCAGTAACTATCTAAATTTTGACTCCTCTGTTAAGCATTTGCTAAAGTTCCTATTCTGTGCTATCTCTCAAATGGATTTGAAGACTGGGTTTCTGTCCCTTGAGAACTTCAAAACCGCATTTTCAAGTATTAATAGGCAACCAAAACTGGAATGTCTAAGAAATTCCTCCATTTTAGAACTTTACATTTTGGTTTGCATGAAGAGGTTGGAAGTTAAAGAGAAAAGCTTCTGCAACTTCAATTCTGTTATGAAAGAGTATAAAAGTATACATGATTCCTTCCAGACTTCTGATTACTATGATCGAAATGTCTGCTTAAGGGCATTTGAACACCTTATAAATCGGGAATTAATATGCTTCGCAGACAATAGAGGGCATAGTTTGTCCGTTGAATATCGTCCTGTCAAGCTTTTAATCTCATCTGCTGAACTGAATCAGGGACTAAGAGCATATCATTCATGCCCCGCTATTCTTCAAAAGCTAATGGATCGTGAAGGCTAG 1266 0.4036 MEMKGENHKEKALNLLRSRVCDPKFAFKALYDSPESNYSKLKFMISSSVTEACNNSILLLGPRGSGKISVLELVIRDLLDEYPESISVIRLSGLLHSDDISAFKEIARQLCMEHQLLFSKSASFDDNSQFMVAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVVGISCRLDADQLLEKRVRSRFSHRKLLFTPPSMEDSQSLLVHMLTIPVDSSFPRDYAIEFNRKVQNIVEDKRFKETFSNYLNFDSSVKHLLKFLFCAISQMDLKTGFLSLENFKTAFSSINRQPKLECLRNSSILELYILVCMKRLEVKEKSFCNFNSVMKEYKSIHDSFQTSDYYDRNVCLRAFEHLINRELICFADNRGHSLSVEYRPVKLLISSAELNQGLRAYHSCPAILQKLMDREG* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3239 421 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 219 401 IPR032705 -
Ahy19g3239 421 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 10 420 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Ahy19g3239 421 CDD AAA 55 203 - -
Ahy19g3239 421 PIRSF ORC4 2 421 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Ahy19g3239 421 Pfam AAA ATPase domain 39 175 IPR041664 -
Ahy19g3239 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 264 IPR027417 -
Ahy19g3239 421 Gene3D - 34 209 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3239 Ahy-Chr19 155570876 155574380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3239 3 418 Core DNA Replication Machinery Family AT2G01120 66.194 0.0 575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3239 19 155570876 155574380 Ahy19g3239 19 155570876 155574380 ECH
Ahy19g3239 19 155570876 155574380 Ahy9g2402 9 112827520 112830881 hybridization