Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3230 ATGACGGACGACGAATTCGCCGATGAACTAGAGCCCTTGTTTGATTACAGTCGCGTTCAGCCCCCCGTCATTTCCCTCGACGATGAAGATGATGATGCTGATAAGGATGTTGTTCCCCCCAAGAAGGGAAAAACCTCTCATGATCCTGTTGTGCCTGAGAAGAAGCAGACTGACGTGAAGCCGGTGCCGGTTGTGGATATTGACGATGAGGATGATTGGTTGCCTCCTCCACCAAAGGTCTCTACTGATGCACACAAGTCTATTGATGAAGATTCAACACTCAAGAAGTTGAGATTGAAGAAGCAGGAACTTCAAGATTTGTTCAAAACTGTTGAGGAGTCTGAAAAAAGTGAAATCTGTGATTCACCGAAGTCTTCCATGGATGATACAAGTGAGAAAACATCAAAACCTGCAGAAAGACCTAAGATTTTGATCTCAATTCAAGACAAGAGCGAAAAGAAGCCAGTTCGTGTGTACAGGGATGACAAGTTTGAAAGGATTTTCAAAATGTATGCTGAGAAACTGGGATGTGATCAAAACAAGATAGTGTTATCATTTGATGGTGATAAAATCAGTCCTTCCGAAACCCCGGATACCCTTGGGATGGAAGATGGTGACATGATTGAAGTTCATGTGAAATCAAGCTGA 648 0.4321 MTDDEFADELEPLFDYSRVQPPVISLDDEDDDADKDVVPPKKGKTSHDPVVPEKKQTDVKPVPVVDIDDEDDWLPPPPKVSTDAHKSIDEDSTLKKLRLKKQELQDLFKTVEESEKSEICDSPKSSMDDTSEKTSKPAERPKILISIQDKSEKKPVRVYRDDKFERIFKMYAEKLGCDQNKIVLSFDGDKISPSETPDTLGMEDGDMIEVHVKSS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3230 215 Coils Coil 94 117 - -
Ahy19g3230 215 ProSiteProfiles Ubiquitin domain profile. 141 215 IPR000626 GO:0005515
Ahy19g3230 215 SUPERFAMILY Ubiquitin-like 131 213 IPR029071 -
Ahy19g3230 215 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 6 215 - -
Ahy19g3230 215 MobiDBLite consensus disorder prediction 35 76 - -
Ahy19g3230 215 CDD Ubl_SUMO_like 142 211 - -
Ahy19g3230 215 Pfam Ubiquitin-2 like Rad60 SUMO-like 145 211 IPR022617 -
Ahy19g3230 215 MobiDBLite consensus disorder prediction 1 92 - -
Ahy19g3230 215 Gene3D - 125 215 - -
Ahy19g3230 215 MobiDBLite consensus disorder prediction 110 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3230 Ahy-Chr19 155437337 155439738 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3230 19 155437337 155439738 Ahy19g3230 19 155437337 155439738 ECH
Ahy19g3230 19 155437337 155439738 Ahy9g2411 9 112989854 112992201 hybridization