Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3203 ATGGCTCCCTTTCTTATATTCAGATTACTGATTTCGTCTACGCTTCTTCTTCTTCTTGCCATGGCTGACGATGGAGAGTGTCCATCCTCTTTCCAGTGTGGGAGTTTTGGAACCATCAAGTTTCCTTTCACAGACTCACGACACCCACACTGCGGCGTGATGCCAATCCATGGCTGTGATGATCCAAATCCAGATGCCCTCAAAACCATTCAACTAACCAACACAACAACGTTTACTGTTTTATACGTGGAACCTCATACCATAACCATCAAAGATATTAATCTCTATTATTATTTGAGATCCAAAAGTTGCAAAACATTCAGCAACAACATAACTCTTCCTCGGATTCCCACCTCTCCATTAGGCTCTTTCTACATTAAATATAATATAACCCTCTTCAGATGCAACAAGTCCCTCACTCTCAACCTTCCGCGGCGTTTTCATAACTATAGAGTGTGTCCAGATTATAATATCTACTATGGCCCTCCAAATGAGGAAATTCCTAAGGGATTCCAGTGGCCAACCAATTTAACAGCATGTTCCAATATTCAGTTACCATTAAAAGATGAGTCAGATACTAGTGACCCATTTTCGTTTCTATCTGATGAGATGCAATTGGAAGTACTATTATCTGATGACTGTGCCAACTGTGTTCAGCACCAAAGTGGTCAATGTCAACTTGACACCCAAGGCAAATTCTATTGCGCCAAAAATAAAAGATCGGCTCAAAAGCTAGGACTAGGAATTGCACTCCCGCTCTTTACTATAATTGGGTTGTTGCTGATTCTATGGCGTTGCAAAGCAAAATGCGGTATTGTTCTTTACTCAAATCCAGAACCAGAGAGTTGCAGTGTATACTTTGGGGTCCCTGTCTTCTCCTATAAGGATCTCCAAGTGGCTACAAAATATTTTGACCCTTCAAGAGTTCTTGGTGATGGAGGCTTTGGTACTGTTTACTATGGAAAACTCAAAGATGGACGTGAAGTAGCCATCAAGCACTTATACGAGCACAACTCTCGGCGATTAGAACAATTCATGAATGAAGTGAAGATCCTAACGCGTTTGCGACATGTAAATCTCGTGTCCCTCTATGGATGCACTTCATATCACAGCCATGAATTGTTGCTTGTGTATGAATACATTCCAAATGGTACTTTAGCAAGTCATCTGCACCATGGATCATCAAGATCTAGCTTTCTTCCTTGGCCTATTAGAATCAAAGTTGCCATAGAAACTGCAACTGCACTGGCTTATCTCCATGCTTCAGACATCATTCACCGCGATGTCAAGACCAACAACATTCTTCTAGACAACAGTTATTGTGTTAAGGTTGCGGATTTTGGGATGTCAAGATTATTTCCAAATGATGTGACACATGTATCCACAGCTCCACAAGGCACCCCTGGCTATCTTGATCCGGAATATCACCAATTCTATCAGCTTACGAGCAAGAGTGATGTGTATAGTTTCGGGGTTGTGCTCATTGAGCTTATATCTTCTAAGCCTGCAGTTGATATGAGTAGGCATAAGGATGAGATTAGCTTGGCGAATCTAGCCATAAACAAGATTAGAAAAGGTGCAATTGGAGAGCTTGTTGATCCTTTCCTTGGGTTTGAGTCAGACAGTGGCGTAAGAAGGGAAATAGTTATGGTGGCAGAATTGGCATTTCAGTGTTTGCAAAGGGACAGAGAATTGAGGCCCTCCATGGAAGAGGTGTTGGAGGCACTGAGGAGAACAGAGAGTGGGAAGGAAGAGGCTAAGGTTTCAGATGGCGATGTGCTTTCAGCAGAAGATGATGAAGAAGAGATGAAAGTGTTGAATGGGATGAAGGCAACACCTTCCCCTAAGGCAGTGACTGATAAGTGGGATAGTGAATCATCTATTACACCCAATATCAGTTCCCAATCAACCAACCAATCTAATGTTGATGTTCGGATTAGTTCACTTAATCAAGAAAAATGA 1962 0.419 MAPFLIFRLLISSTLLLLLAMADDGECPSSFQCGSFGTIKFPFTDSRHPHCGVMPIHGCDDPNPDALKTIQLTNTTTFTVLYVEPHTITIKDINLYYYLRSKSCKTFSNNITLPRIPTSPLGSFYIKYNITLFRCNKSLTLNLPRRFHNYRVCPDYNIYYGPPNEEIPKGFQWPTNLTACSNIQLPLKDESDTSDPFSFLSDEMQLEVLLSDDCANCVQHQSGQCQLDTQGKFYCAKNKRSAQKLGLGIALPLFTIIGLLLILWRCKAKCGIVLYSNPEPESCSVYFGVPVFSYKDLQVATKYFDPSRVLGDGGFGTVYYGKLKDGREVAIKHLYEHNSRRLEQFMNEVKILTRLRHVNLVSLYGCTSYHSHELLLVYEYIPNGTLASHLHHGSSRSSFLPWPIRIKVAIETATALAYLHASDIIHRDVKTNNILLDNSYCVKVADFGMSRLFPNDVTHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSKPAVDMSRHKDEISLANLAINKIRKGAIGELVDPFLGFESDSGVRREIVMVAELAFQCLQRDRELRPSMEEVLEALRRTESGKEEAKVSDGDVLSAEDDEEEMKVLNGMKATPSPKAVTDKWDSESSITPNISSQSTNQSNVDVRISSLNQEK* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3203 653 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 637 IPR044652 -
Ahy19g3203 653 MobiDBLite consensus disorder prediction 619 653 - -
Ahy19g3203 653 Pfam Protein tyrosine and serine/threonine kinase 308 575 IPR001245 GO:0004672|GO:0006468
Ahy19g3203 653 MobiDBLite consensus disorder prediction 579 653 - -
Ahy19g3203 653 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 637 - -
Ahy19g3203 653 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Ahy19g3203 653 MobiDBLite consensus disorder prediction 579 593 - -
Ahy19g3203 653 Gene3D Phosphorylase Kinase; domain 1 278 380 - -
Ahy19g3203 653 SMART serkin_6 304 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3203 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Ahy19g3203 653 Gene3D Transferase(Phosphotransferase) domain 1 381 594 - -
Ahy19g3203 653 SUPERFAMILY Protein kinase-like (PK-like) 281 576 IPR011009 -
Ahy19g3203 653 ProSiteProfiles Protein kinase domain profile. 304 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3203 Ahy-Chr19 155172996 155175624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3203 31 634 Receptor kinase-like Gene Family AT1G25390 46.667 2.84e-161 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy19g3203 PK_Tyr_Ser-Thr 1.70E-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3203 19 155172996 155175624 Ahy19g3203 19 155172996 155175624 ECH