Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3202 ATGTTTGATTTCCAAGTCAACTGGCGTGTCAACAACTTCACAATATTCTTTCCATATATCCAGATCGTGTTGGAAGTAGAATTATCCAGTGATTGTAGACACTGTATTCATCACAGAAGAGGACACTGTCAACTTGACTCCCAAGGAAACTTCCTTTGCGTCACAGATATGAGTTTGGCTATGAAGTTAGGACTGGGTATTGGAATCTCGGTAATAATTATAATCGGCGTGTTGCTGATTATATGGAGTAGGAAAGCCAGATGCGGTGTTGGTTTGTCCCCAAATACAGAACCAGAGAGCTGCAGTGTCTTCTTTGGGATCCCTGTCTTCTCCTATAAGGATCTTGAACTCGCAACAAAATATTTTGATCGTTCCAGAGTACTTGGTGATGGAGGCTTTGGCACTGTTTACTATGGAAAACTAAAAGATGGACGTGAAGTTGCCATCAAGCGCCTATACGAGAACAACTATAGGCGTGTAGAACAATTCATGAATGAAGTTAAGATCTTAACTCGCTTGCGACATGCAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACAGCCATGAGCTCCTGCTTGTTTATGAATTCATTTCAAACGGCACAGTAGCTAGTCATCTCCATGGTGGATCAGCAAGGCCTGCCTTTCTGCCTTGGCATATCCGAATGAAAGTTGCCATAGAGACTGCAACAGCATTGGCATATCTCCATGCTTCAGACATCATTCACCGCGATGTGAAGACCAACAACATTCTCCTGGACAACAACTTTTGTGTTAAGGTTGCAGATTTCGGGATGTCAAGACTGTTCCCGAATGACGTCACACATGTATCCACAGCTCCACAAGGCACCCCTGGCTATCTTGATCCAGAATATCACCAATTCTACCAGCTAACAAGCAAGAGTGATGTGTATAGTTTCGGAGTTGTGCTCATTGAGTTAATATCATCCATGCCAGCAATTGATATGAGAAGGCATAAGGATGAGATTAGCTTGGCAAATCTAGCCACAAACAAGATTAGCAAAGGTGCAATTGCAGAGTTGGTTGATCCTTCCCTTGGTTTTGAGTCAGATAGTGATGTTAGAAGGGGAGTAAATTTGGTAGCTGAATTGGCATTTCAGTGTTTACAAAGGGACAGGGACTTGAGGCCCTCAATGGATGCGGTGTTGGAGGCACTGAAGAGAACAGAGAGTAAAAAGGAAGAGGCTGAGGTGTCACATGGTGATGCGCATTCAGCAGCAGATCATGAAGAAATGAAAGTGTTGAATCAAATGAATGCAACACCTTCATCTTCTCCAACGGCAGTGACTGATAAGTGGGATAGTGAATCTACTACTACACCACCTAGTGTCACTGCTCAATCACGTATTCAATCTAAAAATAGGATCCTATTTTATAGAAGTTCTTAA 1413 0.4289 MFDFQVNWRVNNFTIFFPYIQIVLEVELSSDCRHCIHHRRGHCQLDSQGNFLCVTDMSLAMKLGLGIGISVIIIIGVLLIIWSRKARCGVGLSPNTEPESCSVFFGIPVFSYKDLELATKYFDRSRVLGDGGFGTVYYGKLKDGREVAIKRLYENNYRRVEQFMNEVKILTRLRHANLVSLYGCTSRHSHELLLVYEFISNGTVASHLHGGSARPAFLPWHIRMKVAIETATALAYLHASDIIHRDVKTNNILLDNNFCVKVADFGMSRLFPNDVTHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSMPAIDMRRHKDEISLANLATNKISKGAIAELVDPSLGFESDSDVRRGVNLVAELAFQCLQRDRDLRPSMDAVLEALKRTESKKEEAEVSHGDAHSAADHEEMKVLNQMNATPSSSPTAVTDKWDSESTTTPPSVTAQSRIQSKNRILFYRSS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3202 470 Gene3D Phosphorylase Kinase; domain 1 95 198 - -
Ahy19g3202 470 MobiDBLite consensus disorder prediction 424 457 - -
Ahy19g3202 470 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 20 457 - -
Ahy19g3202 470 Coils Coil 387 407 - -
Ahy19g3202 470 ProSiteProfiles Protein kinase domain profile. 122 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3202 470 ProSitePatterns Protein kinases ATP-binding region signature. 128 150 IPR017441 GO:0005524
Ahy19g3202 470 MobiDBLite consensus disorder prediction 422 457 - -
Ahy19g3202 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Ahy19g3202 470 Gene3D Transferase(Phosphotransferase) domain 1 199 412 - -
Ahy19g3202 470 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 457 IPR044652 -
Ahy19g3202 470 Pfam Protein tyrosine and serine/threonine kinase 125 392 IPR001245 GO:0004672|GO:0006468
Ahy19g3202 470 SUPERFAMILY Protein kinase-like (PK-like) 98 394 IPR011009 -
Ahy19g3202 470 SMART serkin_6 122 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3202 Ahy-Chr19 155169663 155172731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3202 24 454 Receptor kinase-like Gene Family AT1G25390 55.385 1.18e-161 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy19g3202 PK_Tyr_Ser-Thr 7.70E-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3202 19 155169663 155172731 Ahy19g3202 19 155169663 155172731 ECH