Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3195 ATGCTGGTGGTTGATGCCTTTTTGGAGAAACAAATAAGGAGATATACTTATTCAGAGATGAAGAAGGTGACCAACTCTTTCAGAGACAAACTAGGCCAAGGAGGATTTGGCAGTGTATACAAAGGACAATTGCAGGACGGACGCCATGTTGCAGTGAAGATCCTAAGTGAACTGAAAGGTGATGGTGAAGATTTCTTCAATGAAGTTGCGAGTATGAGCAGAACTTCTCATGTTAACATTGTTGCTCTTCTTGGCTTCTGCTTTCAAGGTTCCAAACGAGCTTTGGTTTATGAATTTATGCCCAATGGGTCGCTTGAGAAGTTAATCTATGAAGAAAATACTGTGATAGGGGATCACCAATTGGATTGTCAAACTTTATATGATATTGCAATTGGTGTTGCTCGAGGGCTTGAGTATTTGCACACGGGCTGCAATACAAGAATCTTGCATTTTGACATAAAGCCCCATAACATTCTCTTAGATGAAAATTTTTGTCCCAAAATTTCAGATTTTGGACTTGCAAAAGTTTGCACTAGAAAAGAAAGTATTGTATCAATATTTGGTGCTAGAGGAACTGCAGGCTATATTGCTCCAGAAGTATTTTCTAAGAATTTTGGTGCAGTATCTCACAAGTCAGATGTTTATAGTTATGGAATGATGGTTTTAGAAATGGTTGGACGAAGGAGGAATATCAAAGTTGAAGTTGACGCATCTAGTGAGTTATATTTCCCTCATTGGATATATAATCGCCTTGTGTCAAATCAAGAACTTGGTTTGCGAAGTATAAGAAATGAGTGGGAAAATGAGATGGTAAGAAAGATGACAATAGTGAGCTTATGGTGCATTCAAACCAACCCTTCAAGTCGACCATCAATTAGTAAAGTGGTGGAAATGCTGGAAGGAAGAGCTGAGTTGTTGCAAGTGCCCCCTAAACCATTTTGGTTTTCTCCTTCAACATCTCCCTGA 966 0.3892 MLVVDAFLEKQIRRYTYSEMKKVTNSFRDKLGQGGFGSVYKGQLQDGRHVAVKILSELKGDGEDFFNEVASMSRTSHVNIVALLGFCFQGSKRALVYEFMPNGSLEKLIYEENTVIGDHQLDCQTLYDIAIGVARGLEYLHTGCNTRILHFDIKPHNILLDENFCPKISDFGLAKVCTRKESIVSIFGARGTAGYIAPEVFSKNFGAVSHKSDVYSYGMMVLEMVGRRRNIKVEVDASSELYFPHWIYNRLVSNQELGLRSIRNEWENEMVRKMTIVSLWCIQTNPSSRPSISKVVEMLEGRAELLQVPPKPFWFSPSTSP* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3195 321 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 8 321 - -
Ahy19g3195 321 SMART serkin_6 25 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3195 321 Pfam Protein kinase domain 29 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3195 321 ProSitePatterns Protein kinases ATP-binding region signature. 31 53 IPR017441 GO:0005524
Ahy19g3195 321 PIRSF ILK 9 307 - -
Ahy19g3195 321 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 321 IPR045874 GO:0004672
Ahy19g3195 321 SUPERFAMILY Protein kinase-like (PK-like) 9 300 IPR011009 -
Ahy19g3195 321 Gene3D Transferase(Phosphotransferase) domain 1 100 311 - -
Ahy19g3195 321 Gene3D Phosphorylase Kinase; domain 1 4 99 - -
Ahy19g3195 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Ahy19g3195 321 ProSiteProfiles Protein kinase domain profile. 25 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3195 Ahy-Chr19 155095903 155097008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3195 12 313 Receptor kinase-like Gene Family AT4G18250 60.000 2.16e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy19g3195 Pkinase 4.70E-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3195 19 155095903 155097008 Ahy19g3195 19 155095903 155097008 ECH