Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3189 ATGAAAAGCTCAACTAGTCAATACCCTGTAAATTCTGTTTCCAAGCTTTTCAATGCTCAACTCCATTTTGTTCGGTTTCTTACCTATATCTTGATTCTGGGGTTTGGTGTCACCATTGGAGTCATCTTTAGTTTCTACCTTAAAGACTGCACCTTTAGTCTCCAATTCACTCAGTTATCAGTCTCAGCCTTACCCCGAAAAGCGTCTATGCAGCCGCCGCCGCCACCACCACCGATCACGGAAACACAGACGTCCAATCACAGCCATGTAGGATTAAAGGAGTTCCTTAAGCCTCCTCCAATCATGCATGACATGGATGATAAGGAGCTTATGTGGAGGGCTTCAATGAGTGCAAAGATCCCTGAGTACCCCTTTGATAGAGTTCCAAAGGTGGCATTCATGTTCTTGACAAGGGGTCCTTTGTTCTTTGCACCTTTGTGGGAACAATTCTTCAAAGGGCATGAAGGGTATTACTCAATATACGTGCACTCCAATCCATCTTTCAATGCTTCACAACCTGAGAAGAATTCAGTGTTTCATGGCCGCAGAATTCCCGGCAAGGAAGTGCAATGGGGGAATGTGAACATGGTTGAAGCAGAGCGTCGCCTTCTGGCAAACGCACTCCTTGATGTCTCAAACCAAAGATTCGTTCTCTTATCGGAATCATGCATACCAATCTTCAACTTCACAACCGTCTACTCATACTTAATGAACTCAACACAAAACTATGTCATGGCCTATGATGAGAACAGTCCGGTGGGTCGCGGGCGATATAGCATCCGGATGCTGCCGGACGTGAGCCTTAGGCAATGGAGAAAAGGGTCCCAATGGTTTGAGATGGACAGAGAGCTTGCACTTGAAGTGGTATCAGACAGAAAGTACTTCCCAATTTTTCAGCAATATTGCAGAGGTTCATGTTATGCAGACGAACATTACTTGCCAACATATGTGAGCATCAATTTTTGGGAAGGGAACTCTAATAGGAGTTTGACCTTTGTTGACTGGTCAAGGGGTGGTCCACACCCAGCAACGTTCATGAGATCTGAGGTCACTGTGGAGTTCTTGGAGAAGCTAAGGAGCAAGAGATGCCAGTATAATGGGAACAGCACAAATGTTTGTTTTCTGTTTGCTAGGAAGTTCTTGCCTAATACTTTGTCAAGGCTTCTCAACCTTGCACCTGAGGTCATGCACTTCTAA 1197 0.4511 MKSSTSQYPVNSVSKLFNAQLHFVRFLTYILILGFGVTIGVIFSFYLKDCTFSLQFTQLSVSALPRKASMQPPPPPPPITETQTSNHSHVGLKEFLKPPPIMHDMDDKELMWRASMSAKIPEYPFDRVPKVAFMFLTRGPLFFAPLWEQFFKGHEGYYSIYVHSNPSFNASQPEKNSVFHGRRIPGKEVQWGNVNMVEAERRLLANALLDVSNQRFVLLSESCIPIFNFTTVYSYLMNSTQNYVMAYDENSPVGRGRYSIRMLPDVSLRQWRKGSQWFEMDRELALEVVSDRKYFPIFQQYCRGSCYADEHYLPTYVSINFWEGNSNRSLTFVDWSRGGPHPATFMRSEVTVEFLEKLRSKRCQYNGNSTNVCFLFARKFLPNTLSRLLNLAPEVMHF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3189 398 Pfam Core-2/I-Branching enzyme 131 358 IPR003406 GO:0016020|GO:0016757
Ahy19g3189 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 64 IPR044174 GO:0016757
Ahy19g3189 398 PANTHER CORE-2/I-BRANCHING ENZYME 80 398 - -
Ahy19g3189 398 PANTHER CORE-2/I-BRANCHING ENZYME 1 64 - -
Ahy19g3189 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 80 398 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3189 Ahy-Chr19 155060110 155062789 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3189 19 155060110 155062789 Ahy19g3189 19 155060110 155062789 ECH
Ahy19g3189 19 155060110 155062789 Ahy9g2433 9 113217550 113220110 hybridization