Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3188 ATGGCAGCTCACACACTCGCTTTGATCATCGAAAACCCTTCCAACCATCACGAGTTCCTCCTCGTCAAGCAGCCTCGCCCTCCCAAATTCCACGACCAAGAATACGATTCCTTCGTCGATTCTGATCTCTGGGACTTGCCTTCCGCTCTCTTGAATCCGTTGCAGCCAGGATCGGAGCCGCCGGTTGCGGTGGAAGTGGCTGGCTCGCATTCTGAGGAGCTCAATTTGGGTCAATTCGACATTCGTTCAGCACTCAATGAGGTATTTCTACAAATAGGGTTTGGGGAAGTTGAAGGTGGAGAGTGGAAGTTTTACAAATATATCAAGGAAGCTGCGTTTGGACCCGGTTTGCCCCATAACACAGTCTTCATTGCGGGAAAATTGGTAACTGAAGACGTTGCCTTGCTAGATTCACATAAATGGATGTCCGTCCAGAGCTGTCTTAATTTGCTTCTGGAAGTGAAGCCACAAGACGATCGTGTTGGACCATTGGTAGTCGTTGGTCATATAAACAACTCATTTGACTGTGCTAAGTGGAAAGTCCCACCAGCCATAAACTACCAGGAGTACCCTCCTGGTGTTATACTTATACCTATGGAAAGTAGAACCGCAAAGCCTTTTAGCACAACAAACTTGGTTGTATTTGCACCTGCAAATGCTTCAAATGATTGTGAGGATAATAATTTTATTGCATGTGGAGATGCACTAATTGTTGATCCAGGATGTTTATCAAGATTCCATGGAGAGCTAGAGAAAGTTGTTACTACTTTGCCAAGAAGACTAGTGGTCTTTGTTACTCATCATCACCATGACCATGTAGATGGTCTATCTGTCATACAAAAGTGCAATCCTGATGCCACCTTGTTAGCACATGAGAATACCATGCGCCGCATAAGCAAAGATGACTGGTCACTTGGCTATACCTCAGTTACTGGAGATGATGAAATTAACATTGGTGGTCAGAGATTAAGAGCTATTTTTGCACCGGGACATACAGATGGTCATTTGGCACTGCTTCACAAGAACACTCACTCATTGATTGTGGGGGATCATTGTGTAGGTCAAGGAAGTGCTGTTCTGGACATAACTTCTGGTGGAAATATGACTGAATACTTCCAAACAACATACGAATTTCTCAAGCTCTCACCACATGTTTTAATATCAATGCATGGGAGAATAAATCTCTGGCCAAAGCAGATGCTGTGTGGATATCTGAAGAACCGTAGGAATAGAGAAGCTAATATCTTGAAAGCAATTGAAGGCGGAGCGAAAACATTGTTTGACATTGTTGCATATGTATACGCTGATGTTGACCGCGGTGCCTGGGTTGCTGCATCATCAAATGTGAGGCTCCATGTGGATCACCTAGCCCAACAGCATAAATTACCAAAGGAGTTTTCAATCCAGAAGTTCAAAAATACATGCGGGCTGCAATTTGTATCTCGATGGATATGGGCTTATACTAGTGGCAGTTTACATATAGGGAAATCTTCATTTCTCATTGCTGGTGTTGTGGCTGGAATTGCTGTATTGTATTCTGTCAAAAGCAAGTTAAGTAACCAAACAAGTTAG 1572 0.4351 MAAHTLALIIENPSNHHEFLLVKQPRPPKFHDQEYDSFVDSDLWDLPSALLNPLQPGSEPPVAVEVAGSHSEELNLGQFDIRSALNEVFLQIGFGEVEGGEWKFYKYIKEAAFGPGLPHNTVFIAGKLVTEDVALLDSHKWMSVQSCLNLLLEVKPQDDRVGPLVVVGHINNSFDCAKWKVPPAINYQEYPPGVILIPMESRTAKPFSTTNLVVFAPANASNDCEDNNFIACGDALIVDPGCLSRFHGELEKVVTTLPRRLVVFVTHHHHDHVDGLSVIQKCNPDATLLAHENTMRRISKDDWSLGYTSVTGDDEINIGGQRLRAIFAPGHTDGHLALLHKNTHSLIVGDHCVGQGSAVLDITSGGNMTEYFQTTYEFLKLSPHVLISMHGRINLWPKQMLCGYLKNRRNREANILKAIEGGAKTLFDIVAYVYADVDRGAWVAASSNVRLHVDHLAQQHKLPKEFSIQKFKNTCGLQFVSRWIWAYTSGSLHIGKSSFLIAGVVAGIAVLYSVKSKLSNQTS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3188 523 SUPERFAMILY Metallo-hydrolase/oxidoreductase 232 463 IPR036866 -
Ahy19g3188 523 Gene3D - 398 473 IPR036388 -
Ahy19g3188 523 PANTHER ENDORIBONUCLEASE LACTB2 98 489 - -
Ahy19g3188 523 PANTHER ENDORIBONUCLEASE LACTB2 98 489 - -
Ahy19g3188 523 SMART Lactamase_B_5a 226 390 IPR001279 -
Ahy19g3188 523 Gene3D - 228 396 IPR036866 -
Ahy19g3188 523 Pfam Beta-lactamase associated winged helix domain 425 461 IPR041516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3188 Ahy-Chr19 155049028 155057130 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3188 19 155049028 155057130 Ahy19g3188 19 155049028 155057130 ECH
Ahy19g3188 19 155049028 155057130 Ahy9g2434 9 113223023 113230975 hybridization