Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3178 ATGGAGTGTTACAGAATGCAGGTAGTGGTTATAGTCTCATTGATGCTTCTGTTTCCAAACACACAAGGCTGGGGAGAAGATGGGCATGCCATAGTTTGCAAGATTGCTCAGTCTCGCCTTGGCGACACCGCATCGGAGGCTGTAAAGAAACTGCTGCCAGAGTATGCAGAAAATGACCTGGCGAGTGTATGTTCTTGGGCTGATCATGTCAAGTTCATATTCCATTGGTCTTCAGCTTTGCACTTTGCTGATACACCGGACAATCTCTGCAATTTCCAGTACAACCGGGATTGCAAGGATCAGAATGGAGAAAAGGGAAGATGTGTTGTGGGAGCTATCAACAATTACACCAACCAGCTTCTTAGCTATGGAAGAAACAAAGTTCATTCTCAATATAACCTCACTCAAGCTCTTCTATTCCTTTCTCATTTCATGGGAGATATCCATCAGCCTCTACATGTTGGGTTTCTTGGAGATAAGGGAGGTAACACAATTGATGTTCACTGGTACAAACAGAAGCAAAATCTTCACCATGTTTGGGATGATAGCATAATTGAGACAGCAGAAGAAAGATTCTATGGTTCTGAGATAGGCGACTTCATCAATGCCATTCAAGAAAACATTACGAAAGAATGGGATTCCGAAGTTAAAGGATGGGAAACCTGCAATTCCAATCAGACAACATGCCCAGATATATATGCATCTGAAAGTATAAAAGCAGCGTGTCAATGGGCATATAAGGGTGTCACCGAAGGTTCAGTGCTCGGAGATGATTACTTCTTATCACGTTTACCAACTGTCAATTTGCGATTAGCTCAGGGAGGAGTTAGACTTGCTGCAACTCTCAATCGTATTTTTGGCTGA 864 0.4282 MECYRMQVVVIVSLMLLFPNTQGWGEDGHAIVCKIAQSRLGDTASEAVKKLLPEYAENDLASVCSWADHVKFIFHWSSALHFADTPDNLCNFQYNRDCKDQNGEKGRCVVGAINNYTNQLLSYGRNKVHSQYNLTQALLFLSHFMGDIHQPLHVGFLGDKGGNTIDVHWYKQKQNLHHVWDDSIIETAEERFYGSEIGDFINAIQENITKEWDSEVKGWETCNSNQTTCPDIYASESIKAACQWAYKGVTEGSVLGDDYFLSRLPTVNLRLAQGGVRLAATLNRIFG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3178 287 PANTHER ENDONUCLEASE 2 1 287 - -
Ahy19g3178 287 SUPERFAMILY Phospholipase C/P1 nuclease 24 285 IPR008947 GO:0016788
Ahy19g3178 287 PANTHER ENDONUCLEASE 4 1 287 IPR003154 GO:0003676|GO:0004519|GO:0006308
Ahy19g3178 287 Pfam S1/P1 Nuclease 24 286 IPR003154 GO:0003676|GO:0004519|GO:0006308
Ahy19g3178 287 Gene3D P1 Nuclease 24 287 IPR008947 GO:0016788
Ahy19g3178 287 CDD S1-P1_nuclease 24 286 IPR003154 GO:0003676|GO:0004519|GO:0006308
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3178 Ahy-Chr19 154930738 154932987 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3178 19 154930738 154932987 Ahy19g3178 19 154930738 154932987 ECH
Ahy19g3178 19 154930738 154932987 Ahy9g2447 9 113343933 113346206 hybridization