Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3151 ATGGTAACCGATTCCCACGACTCTCGTCGCAAGCATCGCCGATCCTCCTCTCCGGAAGACGCCGATAGATCCTCGAAGCGCCACAAGCACCGCCACCATAGCCACCGCCATCGCCACTCCACCAAGAAACGCGATGAAGACACCGAATACGATCGCGGAACTCTTGCTAGGATTCCTTCTCCAGCTCCTGTTTCTAACTCTGCTCCGTATAGCTCTCTCCCTGACGACGACGTCGAGGAGGGAGAGATTCTCGAAGAAGGTGAGATTGGAAAAAAGCAGACAGAATCTGATGCAGAGCCTGGTGAAATTGAGCTGTCAGGAAATCGAGATTCTCGATCCGATAACAAAATTCCGGGACCTGTCACAAAAAATTCAAAAACTGGAAAGGAGGACAGAAGTCATGGTAAATATGTTAGTCCTGCATTGGATACTGCAGACAAGCACCCTGGACTTCATGATGACTATGGTTCTCCTAACCAGTCAAGCCCTGAGCTGAAAGGTGGAAAGAATGCTAGAGATACTAAAGATGGTTTGGGTAATGGGTATTTGAACCCTAAATCATCCAAAGAAGATAAGAAGCAGAATGAGGGCCCTGGACAATTGAGAGGAAATGAGAAACTAAAAGGTGACTATGAAGAGAAAGAGATACAGGCAAATGGAATAAAACATAATTACCATACAAATTCATCATCTGATAGTGAAGGTGAAAAATATAGAATGTTAAGAAGTTCTCCTTCTCATGATAGATGTAGAAGTCGATCAAGATCAAGTGGTCATCCTAGGGACAGATCTCGTTCTCGTAGTATAGCAGATGAATATGCTCATTCCAAGAAAAGGCACTCTAGGGATCAAGGGTCCCTTCATCATAGTGGCAGAGATAAGACTGACTATGAGCATGATGAGGAAGGAATGAGAGCACGTGGAAGGGAGCATGGTCGTGGCAATGCAGACTTGTTGGTAGATGACAGGAGGGGACGTAGTTCCAGGTATCGTAGTCGAGAGTCCCAGGATCGCAGTAGGGACAGTCATGTGGATAGGGATTTATACAGGGAAAAGAAACGAGACGAAGCAAGCAGGAATAGGGAGGTTGATTGGGTGCGTAAAACAGAAAAGGAACGTGAAAGGAGCTATGAGAGGGATAGAAGGGACACAATAAAAGACAGAAGTAGGGAAAGGGAGGAGGATAGGGATAGGAGACGAGAAAAGGAGAGAGGCTGGAGCAGGGAAACAGATTTTGAGAGGGATAGAAGAAGGGGAAAGGAAAGGGACAGGAGTAGGGATAATACAAGGGGTGGTGAGAGAGGAAGAGATTGGGATAGTGAAAGGGATGATAAGAATCGGGAAAGAGATCACATTAAGGAGAGGGAGAGGCGAGATGATAGATATAGGCACACTGATAAAGACACCGCATATAATAAGGATAAGCATTTGCGTCATGAGGATGGTGAAGACATTCGAGACAGATATAGAAAACATTCAAGACACGAAGAAACTGAATATCATCGGGAGAGAAACAGGAATTCTGATTCTGTAAAATTTTATAATTCTGCAAGAAGTGCCATGGAAGAGAATGAAAGCAAGCTAGAAAGAGGTGAGGCTGAACAAGATTACTTAGATGAGGATACTCTGCAATTACCAGAGCAAGAAGAGGAAGATCTGAATAGGATTAAGGAGGAAAGTAGACGGAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGCAGAACAGGCAGCTGAAAATGAAGGAAAAGACAAGGAATCCGTGGACATTCCTACTGATGTTCCTGAAGCACATGATGGCAAGAATGATGGTATTGATGATGTAGAAACATCATTTGCTGTTGGGAAATCTACTCCTGAAAATTTGAATGGTGCTTCTAAGAAGATATCTGGTGCTGGTGGCCTGGGTGAGGGTACTCCTAAGAGTGAAAGATCAGACGACATGTTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCGGAAATCAGGAAAAGGGGATGGTATACTGATTGAGAGGGTTGGCCTACATGACAATTGGGATGACGCAGAGGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGCCGATACGAAGTCACTGCTGCACATGGGAGGGGTGTTTTTTCAACAGTGGTTCGGGCAAAGAATCTCAAGACTGGTAATGGTGAGCCAGATGAAGTTGCTATAAAAATCATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAGTTGGTCATACTGAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAAGTATTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATATGCAAAGCAACTATTTATTGCCCTGAAGCATCTTCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCTGATAATATGTTGGTGAACGAGGCTAAAAATGTCTTGAAGCTTTGCGACTTTGGTAATGCTATGTTTGCTGGTAAGAATGAAGTCACACCATATCTTGTCAGTCGGTTTTATCGGGCCCCTGAAATAATTCTTGGCTTGCAATATGATCATCCGTTGGATATTTGGTCAGTAGGCTGTTGTTTGTATGAGCTCTATACAGGGAAAGTTCTTTTTCCAGGTCTTACAAACAATGACATGCTTAGGCTTCACATGGAATTAAAGGGTCCTTTTCCAAAGAAGATGCTGCGTAAGGGAGCATTCACTGACCAACATTTTGATCAGGACCTGACTTTTCTTGCTACTGAAGAGGATCCTGTGACAAAAAAGACGATAAAGCGGATGATTCTCAACATAAAACCAAAAGATATTGGAACAATCATCACAGGCTCTCCTGGAGAGGATCCAAAGATGTTAGCCAACTTCAAGGATCTCATGGATAAAATTTTTATCTTGGACCCAGACAAGAGGTTGACGGTATCACAAGCACTGAACCACCCGTTTATCACTGGCAAGTGA 3069 0.4327 MVTDSHDSRRKHRRSSSPEDADRSSKRHKHRHHSHRHRHSTKKRDEDTEYDRGTLARIPSPAPVSNSAPYSSLPDDDVEEGEILEEGEIGKKQTESDAEPGEIELSGNRDSRSDNKIPGPVTKNSKTGKEDRSHGKYVSPALDTADKHPGLHDDYGSPNQSSPELKGGKNARDTKDGLGNGYLNPKSSKEDKKQNEGPGQLRGNEKLKGDYEEKEIQANGIKHNYHTNSSSDSEGEKYRMLRSSPSHDRCRSRSRSSGHPRDRSRSRSIADEYAHSKKRHSRDQGSLHHSGRDKTDYEHDEEGMRARGREHGRGNADLLVDDRRGRSSRYRSRESQDRSRDSHVDRDLYREKKRDEASRNREVDWVRKTEKERERSYERDRRDTIKDRSREREEDRDRRREKERGWSRETDFERDRRRGKERDRSRDNTRGGERGRDWDSERDDKNRERDHIKERERRDDRYRHTDKDTAYNKDKHLRHEDGEDIRDRYRKHSRHEETEYHRERNRNSDSVKFYNSARSAMEENESKLERGEAEQDYLDEDTLQLPEQEEEDLNRIKEESRRRREAIMEKYKKQHQQAEQAAENEGKDKESVDIPTDVPEAHDGKNDGIDDVETSFAVGKSTPENLNGASKKISGAGGLGEGTPKSERSDDMFCDDIFGETPTGVRKSGKGDGILIERVGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGRGVFSTVVRAKNLKTGNGEPDEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYELYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLTFLATEEDPVTKKTIKRMILNIKPKDIGTIITGSPGEDPKMLANFKDLMDKIFILDPDKRLTVSQALNHPFITGK* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3151 1022 SMART serkin_6 704 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3151 1022 MobiDBLite consensus disorder prediction 186 220 - -
Ahy19g3151 1022 Gene3D Phosphorylase Kinase; domain 1 674 763 - -
Ahy19g3151 1022 Coils Coil 204 224 - -
Ahy19g3151 1022 Coils Coil 514 534 - -
Ahy19g3151 1022 MobiDBLite consensus disorder prediction 548 610 - -
Ahy19g3151 1022 SUPERFAMILY Protein kinase-like (PK-like) 691 1021 IPR011009 -
Ahy19g3151 1022 MobiDBLite consensus disorder prediction 26 40 - -
Ahy19g3151 1022 Gene3D Transferase(Phosphotransferase) domain 1 764 1020 - -
Ahy19g3151 1022 MobiDBLite consensus disorder prediction 1 25 - -
Ahy19g3151 1022 MobiDBLite consensus disorder prediction 85 111 - -
Ahy19g3151 1022 PANTHER DUAL SPECIFICITY PROTEIN KINASE 283 1022 - -
Ahy19g3151 1022 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 283 1022 - -
Ahy19g3151 1022 ProSiteProfiles Protein kinase domain profile. 704 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3151 1022 Coils Coil 561 588 - -
Ahy19g3151 1022 MobiDBLite consensus disorder prediction 229 509 - -
Ahy19g3151 1022 CDD STKc_PRP4 703 1019 IPR044092 GO:0004674|GO:0006468|GO:0045292
Ahy19g3151 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Ahy19g3151 1022 MobiDBLite consensus disorder prediction 1 651 - -
Ahy19g3151 1022 Pfam Protein kinase domain 706 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3151 Ahy-Chr19 154452065 154458783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3151 711 1016 Core Cell Cycle Gene Families AT1G66750 30.284 4.23e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Ahy19g3151 Pkinase 7.60E-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3151 19 154452065 154458783 Ahy19g3151 19 154452065 154458783 ECH
Ahy19g3151 19 154452065 154458783 Ahy9g2477 9 113876287 113883124 hybridization