Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3145 ATGCAAAGATTCAAGCCAACAACTGAATCACCACCATCACACTATTCTCACTCCCTCTTCCACCTTCGGGGAGATGACACTACCACAACTCCAAATCCAACAACGCGTTTAACTGATTCTGATCTTGCCGTTGCTCTTGTATTTCAACAACAGCACTATCACCATGCCTTTGATTTAACCTCAACTTCTCCTCCCTTCACTGCCAAGTTCAACAATGTTGCTGTTGCCTCAAGTAACTTGCAGTACGGGACATTCAACAACAACCTTGCTTCTTCAGGTTGTTACGTTGAGACAGGGCAACAGCAGCAGCAGCAGCATATGTTCCAGCAGAAGGGGCATTTTGAGACTCGGTCTGAATCAGCCATGGCTGACAATAGTCAACAGACCGATGATGCTTCCACTGATATTGACACCGATGATAAAACCCATTGCAATAATAGGGCTGGGAATGGGGAACTTGTAGTTGTGGACTCCAATGATCAAACTAAGCTTAAACATGAGGATCAGAAGACTCTTCGTAGACTGGCTCAGAATCGCGAGGCTGCTAGGAAGAGTCGATTGAGGAAGAAGGCATATGTGCAGCAATTGGAGAATAGTAGAGTTAGGCTTGCACAATTAGAGCAAGAACTTCAACGCGCACGTCAGCAGGGTGTATTTGCTGCAACTGGAACTGTGGGGGATCATGCTCGCGCAGTTGTTGGAAATGGTGCCTTAGCATTTGATATGGACTATGCGCGTTGGGTCGATGAGCATCAACGTCTGATTAGTGACCTAAGATCAGCCGTAAATTCTCAAATGGGTGATAATGAACTGAATCTTCTTGTTGATGGTGTCTTGGCACATCATGATGAACTATTTCGGTTAAAAACCATAGGGGCCAAGGCAGATGTATTTCACATACTTTCCGGAACATGGAAGACACCTGCAGAAAGATGCTTCATGTGGCTAGGTGGATTCCGTCCATCAGAGCTTCTTAAGATAGTTAGAAACCACCTCGAGCCCTTAACAGATGAGCAATTGATGGGAATTTATAATTTGCAGCAGTCTTCTCAGCAGGCAGAGGATGCTTTATCCCAAGGCATGGAAGCATTGCATCAATCTCTTTCGGAGACGCTTTCCTCCACCTCCTTAGGTCCTACCAGTTCTGGAAATGTTGCTCAGTACATGGGCCTAATGGCAATTGCAATGGGCAAACTTGCCACACTTGAGAGTTTTCTTCACCAGGCTGACCTTTTGAGGCAACAAGCACTGCAACAGCTGCAACGAATTTTGGCGACACACCAAGCCGCTCGCGCGCTCTTGGTCATAAACGATTACATCTCTAGGCTTCGAGCGCTTAGTTCATTATGGCTAGCCTGTCCTAAAGAGTAG 1371 0.4617 MQRFKPTTESPPSHYSHSLFHLRGDDTTTTPNPTTRLTDSDLAVALVFQQQHYHHAFDLTSTSPPFTAKFNNVAVASSNLQYGTFNNNLASSGCYVETGQQQQQQHMFQQKGHFETRSESAMADNSQQTDDASTDIDTDDKTHCNNRAGNGELVVVDSNDQTKLKHEDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQELQRARQQGVFAATGTVGDHARAVVGNGALAFDMDYARWVDEHQRLISDLRSAVNSQMGDNELNLLVDGVLAHHDELFRLKTIGAKADVFHILSGTWKTPAERCFMWLGGFRPSELLKIVRNHLEPLTDEQLMGIYNLQQSSQQAEDALSQGMEALHQSLSETLSSTSLGPTSSGNVAQYMGLMAIAMGKLATLESFLHQADLLRQQALQQLQRILATHQAARALLVINDYISRLRALSSLWLACPKE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3145 456 MobiDBLite consensus disorder prediction 103 138 - -
Ahy19g3145 456 SMART brlzneu 166 230 IPR004827 GO:0003700|GO:0006355
Ahy19g3145 456 Pfam Seed dormancy control 255 329 IPR025422 GO:0006351|GO:0043565
Ahy19g3145 456 PANTHER TRANSCRIPTION FACTOR TGA9 57 456 - -
Ahy19g3145 456 MobiDBLite consensus disorder prediction 1 15 - -
Ahy19g3145 456 Gene3D - 169 217 - -
Ahy19g3145 456 Coils Coil 189 216 - -
Ahy19g3145 456 CDD bZIP_HBP1b-like 170 222 - -
Ahy19g3145 456 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 212 IPR004827 GO:0003700|GO:0006355
Ahy19g3145 456 MobiDBLite consensus disorder prediction 1 33 - -
Ahy19g3145 456 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 57 456 - -
Ahy19g3145 456 SUPERFAMILY Leucine zipper domain 170 213 IPR046347 GO:0003700|GO:0006355
Ahy19g3145 456 MobiDBLite consensus disorder prediction 103 132 - -
Ahy19g3145 456 Pfam bZIP transcription factor 169 209 IPR004827 GO:0003700|GO:0006355
Ahy19g3145 456 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Ahy19g3145 456 ProSiteProfiles DOG1 domain profile. 237 453 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3145 Ahy-Chr19 154421706 154424627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3145 1 456 bZIP Transcription Factor Family AT1G68640 55.741 8.90e-157 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy19g3145 DOG1 5.60E-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3145 19 154421706 154424627 Ahy19g3145 19 154421706 154424627 ECH
Ahy19g3145 19 154421706 154424627 Ahy9g2483 9 113915552 113918289 hybridization