Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3142 ATGGCAATGGCCAAGCTTGCCATATACAGCAATAATAATACCATTTTCTTACGTGAAATCATGCCTCTGCTGCTGCCCTATACATACTCTTCACACCATGCACTCTCATTTCAGGTTCCAATGGCTCCTCTGTTTTCCGTCATCGTCCTCTTCATCATCATCATCTGTGATTCCCCGTTGGCACACTCTCGCACCACACCCCATCACATACCTAAAACCACGTTCCTCGATGTCACTGCCTCCATTCAAAAAACCCTTCAAGTTCTCGACTTCAACCACCACAAACAACAAGAGCAACTCAGTTCTACGCCATCATCAAAGCTCTCTCTGCATCTTCATTCTCGAGTATCACTTCAGAAGCCAACACACCACGACTACAAGTCCCTCACTTTATCCCGACTCGAGCGCGACTCAGCCCGAGTCACGACCCTCCTAACTCGTTCACAATCCTTCAGCGTCTCGGAACTTGAGGGACCCATCGTCTCCGGAACTAGTCAGGGAAGCGGCGAGTACTTCTCCCGAGTCGGAATCGGCGAGCCACCGAATCCTGTCTACATGGTCCTCGACACTGGCAGTGACATCAGCTGGGTGCAATGCTCACCCTGCTCCGGTTGCTACCGCCAATCCGACCCGATATTCGACCCGAACTCATCGTCTTCCTTTCACCCACTCTCCTGCGACTCAACTCACTGTCAATTGCTCGACGAATCTCAGTGTCTCAACAGCAACTGCCTCTACGAGGTCTCCTATGGCGATGGTTCCTATACCGTCGGTGAATTCGTCACCGAAACCATCACCATTGGCCAAAGCTCCGTCACAAACATCGCCATCGGCTGCGGCCACAACAACCAAGGCTTGTTCATCGGAGCAGCAGGGTTGCTCGGACTCGGCGGCGGAACCTTATCTTTTCCGGCTCAGCTGAATTCGACGTCGTTTTCATACTGCCTCGTGGATCGCGACTCTGACAAGGTCTCTACTCTCGAGTTTGACTCGCCGTTTCCTAGGAATGCCGTCACCGCGCCGCTACGCCGCAACTCGGAGTTCGAGACATTCTACTACGTAGGGCTCCAAGGGATCGGTGTAGGAGGCGAGCTGCTTCCGATTCCAGAATCGTTATTTGCGGCGGATCCGGCGGGGGGTATCGGAGGGGTGATCGTTGATTCGGGGACGGCGGTGACGCGGTTACGGAGGGAGGTGTATGAGTGGCTGAGAAGGGCGTTTTTAAGTGGGACTCAGGGGTTGGCGATGGCGAGAGGGATGTCGTTGTTTGACACGTGCTACGACATGTCGTCGATGGGCAGTGTGGAGGTTCCGACGGTGTCGTTTCATTTTGAAGGTGGGATGGTCTTGACCTTGGATGCTAACACTTACCTGATACCGGTTGACTCCGTTGGCACCTTCTGCTTTGCGTTCGCTCCCACGAACTCGCCCCTGTCCATCATTGGGAATGTTCAGCAGCAGGGGACACGTGTCAGTTTCGATCTCGCTAATTCCCTCGTTGGCTTCTCTGCTAACAGTTGCTGA 1524 0.5361 MAMAKLAIYSNNNTIFLREIMPLLLPYTYSSHHALSFQVPMAPLFSVIVLFIIIICDSPLAHSRTTPHHIPKTTFLDVTASIQKTLQVLDFNHHKQQEQLSSTPSSKLSLHLHSRVSLQKPTHHDYKSLTLSRLERDSARVTTLLTRSQSFSVSELEGPIVSGTSQGSGEYFSRVGIGEPPNPVYMVLDTGSDISWVQCSPCSGCYRQSDPIFDPNSSSSFHPLSCDSTHCQLLDESQCLNSNCLYEVSYGDGSYTVGEFVTETITIGQSSVTNIAIGCGHNNQGLFIGAAGLLGLGGGTLSFPAQLNSTSFSYCLVDRDSDKVSTLEFDSPFPRNAVTAPLRRNSEFETFYYVGLQGIGVGGELLPIPESLFAADPAGGIGGVIVDSGTAVTRLRREVYEWLRRAFLSGTQGLAMARGMSLFDTCYDMSSMGSVEVPTVSFHFEGGMVLTLDANTYLIPVDSVGTFCFAFAPTNSPLSIIGNVQQQGTRVSFDLANSLVGFSANSC* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3142 507 PANTHER ASPARTYL PROTEASES 60 507 IPR001461 GO:0004190|GO:0006508
Ahy19g3142 507 Gene3D Acid Proteases 331 507 IPR021109 -
Ahy19g3142 507 SUPERFAMILY Acid proteases 164 507 IPR021109 -
Ahy19g3142 507 Pfam Xylanase inhibitor N-terminal 171 328 IPR032861 -
Ahy19g3142 507 Gene3D Acid Proteases 146 329 IPR021109 -
Ahy19g3142 507 ProSiteProfiles Peptidase family A1 domain profile. 171 503 IPR033121 -
Ahy19g3142 507 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 186 197 IPR001969 GO:0004190|GO:0006508
Ahy19g3142 507 Pfam Xylanase inhibitor C-terminal 352 503 IPR032799 -
Ahy19g3142 507 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 60 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3142 Ahy-Chr19 154318897 154320978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3142 161 507 Miscellaneous Gene Families AT1G77480 26.302 7.20e-23 99.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3142 19 154318897 154320978 Ahy19g3142 19 154318897 154320978 ECH