Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2164 ATGCCCTCCTCCGACTCCGGCGAAAGCCGTCGATCAGCCAAGCCTCACAACACTTCCCTAGCCCCACCGCCGGCCGAGCAAGAGCACCTGCCATGCCCTCCCTGCGACTCTACTAATACCAAGTTCTGCTACTACAACAACTACAACTTCTCCCAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACTCTCCGTGACATCCCCGTCGGCAGTGGAAGCCGTAAAAACGCCAAGTGCTCTCGCACCGTTCCTTCAGCCTCCACCGCCACAACCTCCTCCTCCGCGGGTGCGGCCGTCACCTCGGTTTCTTCTGTGACCCCGCTCACCATGGTTCCCGTGGCCGGGAACAACCACCCCGGAGCACCCGTGCAGTTCGGTGGGAGCTTCACTTCGTTGCTGAGCAACACACAGCAGGGTCCTGGTGGGTTTCTGGCTCTGGGTGGGTTCGGGCTTGGTCTTGGGCCTGGCCTCGAAGATGTTGGATTTGGGATGGGGATGGGGAGAGGCGGTTGGGCTTTCCCAGGCGTGGTGGCGGACGGAGGCAGCATTGGCGGCGGTGTTGCGGGCTCTGGTGTTGGGCACACGTGGGGTGAGGGGGAGTGGGGTTACGGGAGTGGGGTGAGGGAGTGA 648 0.6343 MPSSDSGESRRSAKPHNTSLAPPPAEQEHLPCPPCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGSGSRKNAKCSRTVPSASTATTSSSAGAAVTSVSSVTPLTMVPVAGNNHPGAPVQFGGSFTSLLSNTQQGPGGFLALGGFGLGLGPGLEDVGFGMGMGRGGWAFPGVVADGGSIGGGVAGSGVGHTWGEGEWGYGSGVRE* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2164 215 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 205 IPR045174 GO:0003700|GO:0006355
Ahy19g2164 215 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Ahy19g2164 215 MobiDBLite consensus disorder prediction 81 95 - -
Ahy19g2164 215 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Ahy19g2164 215 MobiDBLite consensus disorder prediction 1 16 - -
Ahy19g2164 215 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 205 - -
Ahy19g2164 215 MobiDBLite consensus disorder prediction 72 95 - -
Ahy19g2164 215 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Ahy19g2164 215 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2164 Ahy-Chr19 130801988 130802636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2164 1 194 C2C2-Dof Transcription Factor Family AT5G66940 47.549 7.30e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy19g2164 zf-Dof 3.60E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2164 - - ahf:112786370 322.398