Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1850 ATGGACACAGCTCAGTGGCCGCAGATTTTGGTGAAGCCAATAGAAGAGATAGTTGTGGGAACAAACACATCATTATGTCATCAATCAAAACCACCCTCTTCTAATAATCTTGCATCAGAGAATAATAACAACAACAACAATATCATCAAGAAACCAAGGCCACAGAAGGAGCAAGCCCTAAACTGTCCAAGGTGCCATTCAACAAATACAAAGTTCTGTTACTACAACAACTACAGCCTTACACAACCAAGGTACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGTGGGTCCCTTAGGAACATCCCTGTTGGTGGTGGATCCAGAAAGAACAAGAGATCTTCTACTTCAATATCATCATCACCGTCACCGCCTTCACCCAACAAGAACATCAAGCTTATTGGTAAGGTAGTCCATGAAGGCCAAGATCTGAACTTGGGTTTTCCATCTGATTTCGTTGTTCATCAACAAAACAATAATACTCTTTCTTCTTCTTCTTCTTCTTCAACTATTACTAGTACTGTTACTACTACTACTACTACACCACCCTCTTCTACTACCCAATTCTCAGCAATGGAGCTTCTTACTGGGATCACTTCAGCAAATTCAAGAGGGGGTTTGGGTTTGAACTCTTTCTTGCCTCATCATCCACCTGATCCAAACACAGTGCTGTACAATAATAGTACTTTTGCTCTTCAGGATTTCAATAAGACAGCAGGATTGAATTTCTCTTTGGATGGGATTGGGATTGGGATTGTAGGGAGTGGATTTGCAGGCCTTCATCATCATCAACAAGATCAGACAAGTGGTGGTGGGAATAATAATGGGAGGCTTTTGTTTCCATTTGAGGATTTGAAACAGGTTTCTAACGCCGACGCAATTGATAATCAGAGTAACAGCAAGGTGCATCAACAACAAGGGGATTCAAGTGGATATTGGAGTGGGATGTTAGGTGGAGGATCATGCTCCTCTTAG 978 0.4182 MDTAQWPQILVKPIEEIVVGTNTSLCHQSKPPSSNNLASENNNNNNNIIKKPRPQKEQALNCPRCHSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSTSISSSPSPPSPNKNIKLIGKVVHEGQDLNLGFPSDFVVHQQNNNTLSSSSSSSTITSTVTTTTTTPPSSTTQFSAMELLTGITSANSRGGLGLNSFLPHHPPDPNTVLYNNSTFALQDFNKTAGLNFSLDGIGIGIVGSGFAGLHHHQQDQTSGGGNNNGRLLFPFEDLKQVSNADAIDNQSNSKVHQQQGDSSGYWSGMLGGGSCSS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1850 325 MobiDBLite consensus disorder prediction 101 131 - -
Ahy19g1850 325 MobiDBLite consensus disorder prediction 109 129 - -
Ahy19g1850 325 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Ahy19g1850 325 MobiDBLite consensus disorder prediction 160 186 - -
Ahy19g1850 325 MobiDBLite consensus disorder prediction 296 325 - -
Ahy19g1850 325 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
Ahy19g1850 325 MobiDBLite consensus disorder prediction 25 57 - -
Ahy19g1850 325 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 41 319 IPR045174 GO:0003700|GO:0006355
Ahy19g1850 325 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 41 319 - -
Ahy19g1850 325 MobiDBLite consensus disorder prediction 25 52 - -
Ahy19g1850 325 Pfam Dof domain, zinc finger 58 114 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1850 Ahy-Chr19 100135665 100138039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1850 1 322 C2C2-Dof Transcription Factor Family AT4G24060 39.437 1.25e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy19g1850 zf-Dof 4.80E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1850 - - adu:107465965 539.65