Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0522 ATGCAAGATCCAACAACAGTATTCCAAATCCAACAAGCCTTGCTGAAACAACCACACTTCCCAGAACAAGAACAACAACTAAAGTGTCCAAGGTGTGAATCCACAAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCTCAGCCACGCCATTACTGCAAGAATTGCAGAAGGTATTGGACCAAAGGTGGCGCCTTGAGGAACATACCCGTTGGTGGTGGAACCAGAAAGACCCACAAACGTTCTTCTTCATCTTCATCTTCCACTTCAAATTCATCCATCAAACGGCCTTCATCATCATCATCATCACAACAAGCCAATTCTATTACTACTCATAGTAATAATAGCGTTATTTGTTCCGGGTCTGATTCGACCCGGACTTGCACCGACCCGGTTGGTCAAGATCAGAGGGTGTTGAACATTGGTGGTAGCTTTAGTTCACTATTGGGAAGAGATGGACCTTTTGGGGGGATTTTAGAGGGTATAAATTCAAATGGGTCAGAGCTGAAAATTGGTGAATTTGGTGGTGGGATTGGGAATGTGGGTTCTGGATTGGTCGCGAATCCGGATTCAGGTCGAAACCCGGGTTTGGATATTCAGAATAATGGTGATTCAAGCTATTGGAATAATGGTGGAGGTGGTGGTCATGGTTGGTCTGATCTTGCAATATACACACCTGGGTCAAGCTTTCAGTAG 699 0.4449 MQDPTTVFQIQQALLKQPHFPEQEQQLKCPRCESTNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGALRNIPVGGGTRKTHKRSSSSSSSTSNSSIKRPSSSSSSQQANSITTHSNNSVICSGSDSTRTCTDPVGQDQRVLNIGGSFSSLLGRDGPFGGILEGINSNGSELKIGEFGGGIGNVGSGLVANPDSGRNPGLDIQNNGDSSYWNNGGGGGHGWSDLAIYTPGSSFQ* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0522 232 MobiDBLite consensus disorder prediction 195 210 - -
Ahy19g0522 232 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 15 232 - -
Ahy19g0522 232 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 232 IPR045174 GO:0003700|GO:0006355
Ahy19g0522 232 ProSiteProfiles Zinc finger Dof-type profile. 27 81 IPR003851 GO:0003677|GO:0006355
Ahy19g0522 232 MobiDBLite consensus disorder prediction 78 134 - -
Ahy19g0522 232 ProSitePatterns Zinc finger Dof-type signature. 29 65 IPR003851 GO:0003677|GO:0006355
Ahy19g0522 232 MobiDBLite consensus disorder prediction 68 134 - -
Ahy19g0522 232 MobiDBLite consensus disorder prediction 190 212 - -
Ahy19g0522 232 Pfam Dof domain, zinc finger 25 81 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0522 Ahy-Chr19 6354529 6356591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0522 1 160 C2C2-Dof Transcription Factor Family AT1G51700 50.595 5.40e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy19g0522 zf-Dof 1.50E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0522 - - aip:107619380 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0522 19 6354529 6356591 Ahy19g0522 19 6354529 6356591 ECH