Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0114 ATGGAAAATTGGCTCTCTCATTTGGAAATAAGTGGTGGTGGGAGTGGCTCAAGCAGTGTATCATTTGAAGAGATTTTAAGCTTCAATGGTGGTGATCATAGCTCCAATAATAAGGATAATAATATTATTATTATTGGTGATGAGGCTAATAAACAAGAGAAGAAGAACTCCAAAAGGGGTAGTTTAGGGAATAACAATAATAATAAGAGAACAACAAAGAAGGCAAGAAATTCAATAGAGGCATTGGATCATATAATGTCTGAGAGGAAAAGGAGACAACAAATGGCTGAGAAGTTCATAGCACTTGCAGCTGCTATTCCTGGCTTGAAGAAGATAGACAAGGCATCTATACTTCAAGAAGCAATAAATTATGTGAAAGAACTTCAAGAACGCATAGCACTGCTTGAGAAAGAGAGCAACAACAAAGAACAATTGATTGTGAAAAAATCACAATTTTGTTGTTCTTCTCTGCCGTGTGACAAAAACAATAATGACAACAACATTGGTGGTAATGAAATGGTGCTACCAGAAGTGGAAGCTAGATTGTTAGAAAAGGAAGTACTAATTAGAATCCATTGTGAGAAACGAAATGGAATCATGTTGGAGCTCTTGGCATTTTTGGAAAATAATAATCTCTCTCTGGCTTGTAGCAGCTTCTTGCCATTTGGAAACTCTACTCTCAATGTTATCATCATTGCTCTGATGAACGAGGAATTCAACTTAACATTGAACGATCTGGTGAAGACGTTGAGGGAGTATCTTTTGAAGTTTATGAGATGCAATAATAATAATGGTGGTCCATGCTAG 807 0.3643 MENWLSHLEISGGGSGSSSVSFEEILSFNGGDHSSNNKDNNIIIIGDEANKQEKKNSKRGSLGNNNNNKRTTKKARNSIEALDHIMSERKRRQQMAEKFIALAAAIPGLKKIDKASILQEAINYVKELQERIALLEKESNNKEQLIVKKSQFCCSSLPCDKNNNDNNIGGNEMVLPEVEARLLEKEVLIRIHCEKRNGIMLELLAFLENNNLSLACSSFLPFGNSTLNVIIIALMNEEFNLTLNDLVKTLREYLLKFMRCNNNNGGPC* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0114 268 Gene3D - 68 152 IPR036638 GO:0046983
Ahy19g0114 268 Pfam Helix-loop-helix DNA-binding domain 84 129 IPR011598 GO:0046983
Ahy19g0114 268 Coils Coil 118 145 - -
Ahy19g0114 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 128 IPR011598 GO:0046983
Ahy19g0114 268 SMART finulus 85 134 IPR011598 GO:0046983
Ahy19g0114 268 PANTHER BHLH TRANSCRIPTION FACTOR 22 258 - -
Ahy19g0114 268 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 22 258 - -
Ahy19g0114 268 MobiDBLite consensus disorder prediction 48 78 - -
Ahy19g0114 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 142 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0114 Ahy-Chr19 1048779 1052063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0114 15 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.450 6.07e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy19g0114 HLH 1.90E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0114 - - ahf:112712745 450.284