Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1759 ATGGCATCATCAGTGATGGCTTCAGTGAGCTTAAAACCTGCACCTTTCACTGCTGAGAGGTCCTCAGTTAGAGGGATCCCATCCCTTTCAAGGGCATCCTCTTCCTTCAAAGTCGTGGCCAGTGGTGGCAAGAAAATCAAGACTGATAAGCCTTATGGAATTAATGGAGGCATGAACTTGAGGGATGGACTTGATGCATCTGGCAGGAAAGGAAAGGGAAAGGGTGTGTACCAGTTTGTGGACAAGTACGGTGCTAATGTCGATGGTTACAGTCCTATCTACGATCAAAAGGATTGGTCTCCCACTGGTGATGTCTACACTGGCGGTACGACTGGCTTGGCTATCTGGGCTGTGACTCTTGTTGGCCTTCTTGCTGGTGGTGCACTTCTTGTCTACAACACAAGTGCTTTGTCACAATAG 420 0.4833 MASSVMASVSLKPAPFTAERSSVRGIPSLSRASSSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTGGTTGLAIWAVTLVGLLAGGALLVYNTSALSQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1759 139 Pfam Photosystem II 10 kDa polypeptide PsbR 41 138 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
Ahy18g1759 139 PANTHER PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC 1 139 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1759 Ahy-Chr18 58197923 58200229 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1759 18 58197923 58200229 Ahy18g1759 18 58197923 58200229 ECH
Ahy18g1759 18 58197923 58200229 Ahy7g1883 7 72083251 72085669 hybridization