Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1703 ATGAATAAATTAATTATTGTTTGTGCTGTTGTTGTTAGCAAAAGAGATATGAGAGCGAGCGCGCGCGATGCGATTGCGGTGCTCAAGGCTCAATTACTATTCCTCTTCTTCTTCTTCCTCTGGTTCCTCATCGGCGGCGGCGCCGTCCAATGCACCGGCGGCGAGAAGTGCCGGTCGCCGCCGCAGAAGCAGTTGTTGATGGCCCTGCAGATGACGTGGCAGCCGAACCTCCTGAGCCAAAAGCGCAAGAGCGGTCCTCCCTTAGGTCTTCGCAACCTCGGCAATTCTTGCTACCTCAACAGCGTTCTCCAGTGCCTCACCTACACTCCCCCTCTCGCTAATTTCTGCCTCCGCTTCCAACACTCTTCCCTCTGTGATTCTTCTTCTTCTTCCTCCTCGAATTCGAATTCATCGAATTGTCCGTTCTGTATTCTCGAGAAGCAGATTGCGAGGTCCCTGCGCGTGGATCTCACGCACGACGCACCGTTGAAGATTCAGAGCTGCCTCCGGATCTTCGCTGAGCACTTCCGGTGCGGCCGACAGGAGGACGCGCACGAGTTCCTGCGGTACGTAATCGACGCCTGCCACAACACCTGCCTCCGCCTCAAGAAGCTCCGCCGCAAGGGCGGCGGAGATGGTGGTGCTGAGAACGGAGCCGGCGGTGGGAGCTCAACGGTGGTGAAGGAGATTTTCGGTGGTGCGCTGCAGAGCCAGGTGAAGTGCCTGTGCTGTGGATATGAGTCGAATAAGGTCGATGAGATAATGGATATTAGCCTTGATGTTTTCCATAGTAACTCGCTTAGAGATTCATTGCAAAAGTTCTTCCGGCCTGAGGTTTTAGATGGGAACAATAAGTACAAATGTGATAGTTGTAAGAAATTAGTGCCGGCAAAGAAGCAGATGAGTATACTCCAAGCGCCTAATATTCTTGTTATACAGCTCAAGAGATTTGAGGGCATATTGGGGGGCAAGATTGATAAGGCTGTTGCATTTGAAGAGGTTTTGTTACTTTCTAGCTTCATGTGCAAAGCGAGTCAGGATCCACTACCAGAATATAAGCTTTTTGGTACTATTGTGCATTCAGGCTACTCCCCGGAGTCTGGTCACTATTATGCCTACATAAAGGATGCAATGGGTCGATGGTATTGTTGTGATGATTCTTGTGTAACAGTTGCAAGTTTGCAAGAAGTTTTGTCAGAGAAGGTTTATATTCTTTTTTTCTCTCGAACTACTCAAAGGCCAGCGTTAGTTAATGATTCTCTTGTTTCCAACGGCGTAAAGCCTCATCACTCCAATGGGAGTCAGGCATCTGAAAGTGCGAAGGTTGAGGCACCATTGAAAGCAGTGCATTCAAAATCAAATTCTGAGCAATCTACTTGGAAGGATATGCCAAGGGTATCTAAAATTAGTAAAGGGCCTTCTAGCTCAAGAGTGAAGTTTGACATTAATGGAAATTCTGCTTCCAAGAGAAGTCCTGCTCCTGCAACTGTCAATGGGAAAGTGGACATTTCTAAGAATCAGCTTGTGGTAATTAATGGGCATGTGAAGGACACAGTTTCTTTGGAGAATGGTAAGAAAGATCCTCCGTCACTGCCAGCCAGGAATGGCTCTGTGAAAAATAAAGTTGACGTAGGTGATAGATTTAAAAGAAAGGATTCAGCATTAACAAATGGTTCCACTGATATTCATTCAGTTGATATGCATTTTGCCAAATCAGATCCAACGGTAGACAATAATAGAAGCACGGTAACAACAGGTAAGGGGCCAGAAAACTTTAAGCAAGAAAGCAATGGCCACGGTGAACCTAAAATATTGGGGAAGAGGAAAGTACAGGATACTTCAAGCATTTTGCTTGCACATGATGGTCAGTCTCGAACAGAAGTTGAAGAGTTGAAAGACATTCTTGCAAAAGAAGCCAAGTCTGCTTTGAGGTCATGTGGCTGGACAGAAAACGTTTTTAACTTCATGCGATCTAGAAAGAGGTTACGAGCACAAGAAGCTGGTCATATAACAGGTGCAGACGAGATAAGGAGGTCATTAATAAGAGATGCGAAGGGAGCTTTCTTATCTAAGATTCCTGAGTCACTGAGGAAGGATCTGATTGAACGTCTCCGGTCGTTTAGCCAAGATAAATAG 2136 0.4644 MNKLIIVCAVVVSKRDMRASARDAIAVLKAQLLFLFFFFLWFLIGGGAVQCTGGEKCRSPPQKQLLMALQMTWQPNLLSQKRKSGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRFQHSSLCDSSSSSSSNSNSSNCPFCILEKQIARSLRVDLTHDAPLKIQSCLRIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGDGGAENGAGGGSSTVVKEIFGGALQSQVKCLCCGYESNKVDEIMDISLDVFHSNSLRDSLQKFFRPEVLDGNNKYKCDSCKKLVPAKKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLLLSSFMCKASQDPLPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVASLQEVLSEKVYILFFSRTTQRPALVNDSLVSNGVKPHHSNGSQASESAKVEAPLKAVHSKSNSEQSTWKDMPRVSKISKGPSSSRVKFDINGNSASKRSPAPATVNGKVDISKNQLVVINGHVKDTVSLENGKKDPPSLPARNGSVKNKVDVGDRFKRKDSALTNGSTDIHSVDMHFAKSDPTVDNNRSTVTTGKGPENFKQESNGHGEPKILGKRKVQDTSSILLAHDGQSRTEVEELKDILAKEAKSALRSCGWTENVFNFMRSRKRLRAQEAGHITGADEIRRSLIRDAKGAFLSKIPESLRKDLIERLRSFSQDK* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1703 711 MobiDBLite consensus disorder prediction 574 592 - -
Ahy18g1703 711 SUPERFAMILY Cysteine proteinases 86 409 IPR038765 -
Ahy18g1703 711 MobiDBLite consensus disorder prediction 571 604 - -
Ahy18g1703 711 MobiDBLite consensus disorder prediction 450 493 - -
Ahy18g1703 711 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 67 462 - -
Ahy18g1703 711 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 17 67 462 - -
Ahy18g1703 711 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 88 410 IPR028889 -
Ahy18g1703 711 MobiDBLite consensus disorder prediction 519 539 - -
Ahy18g1703 711 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 352 370 IPR018200 GO:0004843|GO:0006511
Ahy18g1703 711 CDD Peptidase_C19E 87 408 - -
Ahy18g1703 711 Pfam Ubiquitin carboxyl-terminal hydrolase 89 407 IPR001394 GO:0004843|GO:0016579
Ahy18g1703 711 MobiDBLite consensus disorder prediction 423 439 - -
Ahy18g1703 711 Gene3D Cysteine proteinases 82 412 - -
Ahy18g1703 711 MobiDBLite consensus disorder prediction 423 498 - -
Ahy18g1703 711 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 89 104 IPR018200 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1703 Ahy-Chr18 50323492 50332949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1703 87 415 Miscellaneous Gene Families AT2G24640 37.651 9.56e-59 205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1703 18 50323492 50332949 Ahy18g1703 18 50323492 50332949 ECH
Ahy18g1703 18 50323492 50332949 Ahy7g1918 7 73280041 73287622 hybridization