Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0954 ATGGGAATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGTGGTCACATTGTTCGATCCACCGGCCGGAAAGATCGACACAGCAAGGTTTACACGGCGAAAGGGCCGCGTGACCGTCGAGTTAGGCTCTCGGCACACACTGCAATCCAATTCTATGATGTCCAAGACAGGCTTGGTTATGACAGGCCAAGCAAGGCAGTGGACTGGCTTATCAAGAAGGCCAAAGCAGCCATCGACAAACTCGCCGAGCTCCCTCCTTGGGAGCCTACACCTCCTCCTCCCACTACCAATGAGGTGGAGGAGGATCAGAATGGAGGATCAACTGACATGGCAATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTTCAAAGGCAACTTGGTGAAGACCCTGAAAACCAACACCACCACTCAGCATTCATTCCTTCACCTATTGACACTGATGGTGGCATAGCATTTTTCCCAACAACGTCTGCTGCTTCCTCCATCAATTTCCAGAGCTACCCTCCTGAGATAATCTCAAGGACCAACAACTCCTCAGAGGATCTTGGACTTTCCCTTCATTCTTTCCAAGATTCTGGCCTAATTCATCATCATGGACAGTCACAACAAGGAGGTGGTGCAGATCATCAAAACCCTTCTTCAAATGACCAAACTCTCTTTGCTAACTACCAGAGAATGGTGGCCTGGAACAGTGATGCCGGAGGCACGCAAGCCGACATGAACCGTTCCGGTTTCATGGTGAATTCACCTGGTTTTTCTTCTGCTTTTTCTCATCATCAACAAAGGGGTACCCTTCAGTCCAGTTTCTCACCATCACTTCGCCCTTGGAGTGAGATTCCTCAAATGGCTTCTTCTAACGAGCATCACCACAACCACAAGTCTCAGCCAATCCAGCAGCAACACCAAGCTTCAATCTTTGGAAGCAGGTTCCTCTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGGATTCAAGGTGAAGATGAGAGCCATGGTGTTGGCTCTGACAGGCCTTCATCTTCTGCTTCTCCTAATTCACATCACTGA 1059 0.4901 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDKLAELPPWEPTPPPPTTNEVEEDQNGGSTDMAIAEQSESSGYNFQLQRQLGEDPENQHHHSAFIPSPIDTDGGIAFFPTTSAASSINFQSYPPEIISRTNNSSEDLGLSLHSFQDSGLIHHHGQSQQGGGADHQNPSSNDQTLFANYQRMVAWNSDAGGTQADMNRSGFMVNSPGFSSAFSHHQQRGTLQSSFSPSLRPWSEIPQMASSNEHHHNHKSQPIQQQHQASIFGSRFLSDALPGFCIPARIQGEDESHGVGSDRPSSSASPNSHH* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0954 352 MobiDBLite consensus disorder prediction 199 220 - -
Ahy18g0954 352 MobiDBLite consensus disorder prediction 1 30 - -
Ahy18g0954 352 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 352 IPR005333 GO:0003700
Ahy18g0954 352 Pfam TCP family transcription factor 23 124 IPR017887 -
Ahy18g0954 352 MobiDBLite consensus disorder prediction 327 352 - -
Ahy18g0954 352 MobiDBLite consensus disorder prediction 85 106 - -
Ahy18g0954 352 MobiDBLite consensus disorder prediction 260 281 - -
Ahy18g0954 352 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Ahy18g0954 352 PANTHER TRANSCRIPTION FACTOR TCP4 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0954 Ahy-Chr18 12213926 12216744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0954 8 351 TCP Transcription Factor Family AT3G15030 42.432 3.97e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy18g0954 TCP 3.50E-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0954 18 12213926 12216744 Ahy13g1829 13 30175090 30177099 ECH
Ahy18g0954 18 12213926 12216744 Ahy18g0954 18 12213926 12216744 ECH
Ahy18g0954 18 12213926 12216744 Ahy8g1702 8 34637311 34640193 hybridization
Ahy13g1829 13 30175090 30177099 Ahy18g0954 18 12213926 12216744 PCT