Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0214 ATGCAAGACCCAACAATATTTCAACCCATCAAACCCCAATTTCCTGAACAAGAACAACTTAAATGCCCACGTTGCGACTCAACAAACACCAAATTCTGCTACTACAACAACTACAATCTCTCACAGCCACGCCATTTTTGTAAGAATTGCAGAAGGTATTGGACCAAAGGAGGTGCTCTTAGGAACATCCCAGTTGGTGGTGGAAGCAGGAAGAACACAAAAAAATCATCCACCAACAACTCCTCCTCCAAACGCCTTACATCATCATCTGCACCATCATCATCATCAGTATCCCCTTCACCATCCGTTTCCACTCCAGCACAGGCTGCTTCATCCGCTCCTGAATCCGACTCGGCCCAGGCCTACGCCGCCCAGCCTACTGTGGCTGATCAAGGCCCAGGCTTAAGCTTCAGTTCCCTATTGGCAACTAGCCATTTGGGGAGCCTATTGGAGGGTCTGAATTCAAATGGATCAAGTCTTAAAATGGTGCAAATGAATGAATTCGGAGTGAATGTGAATTCGACCGGTTCTGTTGAGCCGCCTGTGAGCTCGAATTCTAGTAGAAATCCAGGGTTGGATGTTCAGAGTAATGGCAATAATGCAGAGAGCTTTCTGAGTATGCATAATGGTGATTCAAGCTGTTGGAATAATGGTAGCAATGGATGGTCTAATCTTGCAATATTTACACCAGGATCAAGCTTTCAGTAG 708 0.4576 MQDPTIFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKKSSTNNSSSKRLTSSSAPSSSSVSPSPSVSTPAQAASSAPESDSAQAYAAQPTVADQGPGLSFSSLLATSHLGSLLEGLNSNGSSLKMVQMNEFGVNVNSTGSVEPPVSSNSSRNPGLDVQSNGNNAESFLSMHNGDSSCWNNGSNGWSNLAIFTPGSSFQ* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0214 235 MobiDBLite consensus disorder prediction 175 205 - -
Ahy18g0214 235 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Ahy18g0214 235 MobiDBLite consensus disorder prediction 69 126 - -
Ahy18g0214 235 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Ahy18g0214 235 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Ahy18g0214 235 MobiDBLite consensus disorder prediction 61 126 - -
Ahy18g0214 235 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 235 IPR045174 GO:0003700|GO:0006355
Ahy18g0214 235 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 2 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0214 Ahy-Chr18 1694607 1696471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0214 11 150 C2C2-Dof Transcription Factor Family AT1G51700 56.338 7.86e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy18g0214 zf-Dof 2.20E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0214 - - adu:107458974 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0214 18 1694607 1696471 Ahy18g0214 18 1694607 1696471 ECH
Ahy18g0214 18 1694607 1696471 Ahy9g0426 9 5094973 5096978 PCT
Ahy9g0426 9 5094973 5096978 Ahy18g0214 18 1694607 1696471 PCT