Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3258 ATGGCTCCCTACCATCTCCAAGACGCTCTATACTGCTCAGAGGAAGAGGATGAATTAGAACAAGATGAGGGTTCCGGGAAGAGAGTAGAAGGGGATATGTTTTGGGATGATGAGGAGCTTGCGTGGATGCTGGCCAGGGAAGAACAACACACACACACCCCTCTCTGCTTCCAATTGGACTCTGCTCGCAGAGACGCGGTCGAGTGGATACTCAAAGTCAGCTCACATTACTCCTTCTCTCCTCTCACTTCTCTTCTTGCCGCCAACTACCTTCACAGGTTCCTCTTCACTTTCTCCTCCATTAACAATCTCAATAAGCCATGGATCACTCAGCTGGCTGCCGTCGCTTCTCTCTCACTCGCTGCCAAGCTTGAAGAGACTCATCTTCCCCACTTACTAGACCTCCAAGTGGAGGATTGCAGATACGTGTTCGAAGCCAAAACCATCAAGAGGATGGAGATTTTGGTGCTTTCAACTCTCCGATGGAAAATGAATCCCGTCACTCCTCTCTCTTTTCTCGACTATATCACGCGAAGACTTGGATTATTCAACTTGAACGACTTCCTCACCAGATCCCAATCCCTTCTTCTATCTACCCTTCCAGATAGCAGGTTCATGAGTTACCTTCCTTCTGTGGTGGCAACTGCCACAATGATGCACGTGTTGAATAGCGTGGAGCAGCGAAACCAGGTGGTACGCATTCTTGGAACGAACAAAGAGAAGGTGGATGAATGCTTGAAGCTGATATGGGAACAGGGGAAGAAGAAACGCAAGTTTGGATGGGTTCCAGATAGTCCAAACGGCGTCATGGATGTGTCGTTTAACTCTGCCTCTGATGATAGCTCCAATGATTCATGGCCTCTACTACTTGCTAATAATAATAACAACAATGTTTCTTCACCGGAACCTAAGAAGAATAGGACTCTACTAAACCCTCCCAACTCATCCCATTTCATTTAG 960 0.4729 MAPYHLQDALYCSEEEDELEQDEGSGKRVEGDMFWDDEELAWMLAREEQHTHTPLCFQLDSARRDAVEWILKVSSHYSFSPLTSLLAANYLHRFLFTFSSINNLNKPWITQLAAVASLSLAAKLEETHLPHLLDLQVEDCRYVFEAKTIKRMEILVLSTLRWKMNPVTPLSFLDYITRRLGLFNLNDFLTRSQSLLLSTLPDSRFMSYLPSVVATATMMHVLNSVEQRNQVVRILGTNKEKVDECLKLIWEQGKKKRKFGWVPDSPNGVMDVSFNSASDDSSNDSWPLLLANNNNNNVSSPEPKKNRTLLNPPNSSHFI* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3258 319 Pfam Cyclin, N-terminal domain 47 165 IPR006671 -
Ahy17g3258 319 SMART Cyclin_C_2 167 283 IPR004367 -
Ahy17g3258 319 SUPERFAMILY Cyclin-like 150 258 IPR036915 -
Ahy17g3258 319 Pfam Cyclin, C-terminal domain 167 253 IPR004367 -
Ahy17g3258 319 CDD CYCLIN 63 95 IPR013763 -
Ahy17g3258 319 Gene3D - 53 165 - -
Ahy17g3258 319 PANTHER CYCLIN D3.1 PROTEIN 29 302 - -
Ahy17g3258 319 SUPERFAMILY Cyclin-like 34 165 IPR036915 -
Ahy17g3258 319 SMART cyclin_7 68 158 IPR013763 -
Ahy17g3258 319 SMART cyclin_7 171 251 IPR013763 -
Ahy17g3258 319 MobiDBLite consensus disorder prediction 285 319 - -
Ahy17g3258 319 Gene3D - 43 247 - -
Ahy17g3258 319 PANTHER CYCLINS 29 302 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3258 Ahy-Chr17 134724152 134725527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3258 2 307 Core Cell Cycle Gene Families AT5G67260 43.860 2.19e-77 240
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3258 17 134724152 134725527 Ahy15g0606 15 7688950 7691556 ECH
Ahy17g3258 17 134724152 134725527 Ahy11g0990 11 21778015 21780076 ECH
Ahy17g3258 17 134724152 134725527 Ahy19g3278 19 155886328 155888273 ECH
Ahy17g3258 17 134724152 134725527 Ahy17g3258 17 134724152 134725527 ECH
Ahy17g3258 17 134724152 134725527 Ahy8g0977 8 18826146 18827786 hybridization
Ahy16g3491 16 152326985 152329557 Ahy17g3258 17 134724152 134725527 PCT
Ahy6g2738 6 113022980 113025552 Ahy17g3258 17 134724152 134725527 PCT
Ahy17g3258 17 134724152 134725527 Ahy16g3491 16 152326985 152329557 PCT
Ahy17g3258 17 134724152 134725527 Ahy6g2738 6 113022980 113025552 PCT