Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3246 ATGTGCTCCGGCGAGTCAACTATGAACGGCGCTCAGTCGCGAGACGATGAGTCGAAAGAAGACGACAGGGACGCAGAAGCGAACCGACTGCTGCACCAGCAGCAGCAGAAGCAATCGACGTCATCGAAGGATGACGAAGAGGTGGCGTACGAGGCAGGGGAGAAGATCCAGGTGGTAGATTTCGACTCGGTGGACGGCGATGACGATTCAGGTGTTCCCCCTCCGTTCTCGTGGAAGAAGCTGTGGCTGTTCACTGGTCCCGGGTTCCTGATGAGCATAGCGTTCTTGGATCCGGGGAATCTCGAAGGGGATCTCCAGGCTGGAGCCATCGCAGGGTACACGCTTCTATGGCTGCTGATGTGGGCCACCTTCATGGGCCTCTTAATACAGCTTCTCTCGGCAAGGATTGGGGTGGCCACTGGGCGCCACCTGGCAGAGCTATGCAGGGAGGAATATCCCAATTGGGCGAGGCTAGTTCTATGGTTCATGGCCGAGCTGGCACTCATTGGGGCTGATATTCAAGAGGTCATTGGCAGTGCCATCGCTATCCAAATTCTGAGCCGCGGGGTTTTCCCACTCTGGCTTGGAGTTTTGATTACCGCTTCTGATTGTTTTGTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATTGTTACTATGGCTCTTTCTTTTGCCTGGATGTTTGCTGACACGAAACCTAGTGGGAAAGAACTTTTGACGGGTATTTTGCTTCCAAGACTTAGCTCGAAAACAATTCGTCAAGCTGTCGGTGTTGTTGGTTGTGTCATAATGCCTCACAATGTATTCTTGCATTCTGCTTTAGTGCAGTCAAGGAAGATAGATCCCCAGAAGAAAGGCCGGGTACAGGAGGCTCTCAACTACTATACAATTGAATCAACAGTTGCACTTGCAGTCTCCTTCATGATCAATCTATTTGTCACGACAGTTTTTGCTAAGGGATTTTATGGCACAAAGCAGGCTGATAGCATGGGATTGGTGAATGCAGGGCAGTACCTTGAGGAAAAGTACGGAGGAGGGATCTTCCCCATTCTTTATATATGGGGCATTGGGTTATTGGCAGCTGGACAGAGTAGCACCATCACAGGCACATATGCTGGCCAATTCATAATGGGTGGTTTCCTCAACCTTCGGTTAAAGAAATGGTTGAGAGCATTGATCACTCGTAGTTTTGCAATTGTGCCAACTATAGTCGTAGCTATTGTTTTTAATACATCAGAAGCCTCATTGGATGTTTTGAATGAATGGCTTAATGTGCTTCAGTCCATGCAAATTCCCTTTGCACTGATTCCCCTCCTGACCTTGGTCTCCAAGGAGCATATCATGGGGACCTTTAGGGTTGGGCCTGTTCTTGAGAGGGTGGCATGGACTATTGCTGCACTTATAATGGTAATTAATGGGTATCTCTTGTTAGATTTCTTCCTGTCTGAGGTGAAGGGCCTGCTGCTTGGTTTTGTAGTTTGTTCATGCACAGCTGCCTATGTTGCATTCATTGCATATTTGGTTTCTCAGAGCGGTGCTCTTCCACACACTTGGGTTAATAGAATCCCCAAGGGTTTTTCTCTCCTCCAAATTGAATCAACAAATTCATACGACATTAAAAATCCGGAAAATAGTACTGCAAACTCCAGCTAA 1680 0.4786 MCSGESTMNGAQSRDDESKEDDRDAEANRLLHQQQQKQSTSSKDDEEVAYEAGEKIQVVDFDSVDGDDDSGVPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYTLLWLLMWATFMGLLIQLLSARIGVATGRHLAELCREEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGVFPLWLGVLITASDCFVFLFLENYGVRKLEAAFAVLIVTMALSFAWMFADTKPSGKELLTGILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPQKKGRVQEALNYYTIESTVALAVSFMINLFVTTVFAKGFYGTKQADSMGLVNAGQYLEEKYGGGIFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIVVAIVFNTSEASLDVLNEWLNVLQSMQIPFALIPLLTLVSKEHIMGTFRVGPVLERVAWTIAALIMVINGYLLLDFFLSEVKGLLLGFVVCSCTAAYVAFIAYLVSQSGALPHTWVNRIPKGFSLLQIESTNSYDIKNPENSTANSS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3246 559 Hamap Divalent metal cation transporter MntH [mntH]. 66 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 Pfam Natural resistance-associated macrophage protein 102 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 PRINTS Natural resistance-associated macrophage protein signature 190 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 PRINTS Natural resistance-associated macrophage protein signature 215 236 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 PRINTS Natural resistance-associated macrophage protein signature 371 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 PRINTS Natural resistance-associated macrophage protein signature 433 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 PRINTS Natural resistance-associated macrophage protein signature 160 186 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 PRINTS Natural resistance-associated macrophage protein signature 264 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 PRINTS Natural resistance-associated macrophage protein signature 399 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 PANTHER BNAC08G04640D PROTEIN 28 529 - -
Ahy17g3246 559 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 28 529 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 79 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy17g3246 559 MobiDBLite consensus disorder prediction 12 30 - -
Ahy17g3246 559 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3246 Ahy-Chr17 134548465 134552193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3246 15 520 Inorganic Solute Cotransporters AT1G47240 78.458 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3246 K21398 - gmx:100795013 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3246 17 134548465 134552193 Ahy17g3246 17 134548465 134552193 ECH
Ahy17g3246 17 134548465 134552193 Ahy8g0962 8 18440238 18443943 hybridization