Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3239 ATGGCATCCACTTTTAATCGATGGGAGAAAGATCCTTTCTTTACCGCTGCCGAACAAGTTCAGGAGTCCGCAGACAGGATGGAATCTGCGTTTAGGGCATGGATTCATGCAAAGAAAGATGCGTGCAGCCCTTGGAACTCTGATGAAATATGCCGGGATGTGCATACTGCTCTTGGCACTGCTAAATGGCAGTTAGATGAATTTGAAAAAGCGGTTACATCGAGTTATAACAATAGCTCAACTAAGGATGCAAGAAATAGGCACCAAGATTTCATTTCTGCCATTGTTGACAAGATTACAAAAGTTGAACATTCCTTAAATGAGTCCCTTCATCCAGGTAACAAGGTGCCTCTGCCTTGGGTGCGGCTAGATGAAGGAGAAAGAGACGAGCTCGCATTGTTCCTTTCCGGTATGCCAGAGGCTGAAGGAAAATCTGTTGGTAGAGACCATGAGGATTCACAGTCAACATCTGGCTGGGGCTCCACACTAGAAGTGGAGGACAAATCACCTGGGCATCGCAGGGCGGCTAGTGCTGATGCCCATGTTAGTTCTTGGAAAATTGCTGTTTCTGATGAGCTTCAACAACGCAATACCCCCGACGGTTCTTCTGGTGCTATGCATAAGGTAGCCAGTCTCTCTGCGTTTGTTAGCTCCATGGAATCAGTCTCTAAGTTGAAGTGGGCCAAGAATGGTTATAAAAAGCTCAAAGCAGGAAATCATCATCAAGAAAGTGATAATGCACTGCTACCATCAGCGCAATTGAATGGGGGCTTGAATTCATGCTATGAAAGAAGTAAGAGTTACCTTGATAGCTGTGATGAATGTTATGATAAGCAACTATATGGATGGTATGGGGCTATTCAAAGACAGCTTCAAAGATCTCAATACCAAATGCAGTACAGTAGGCCTGTTCAGTTAACTGTGTGGATATCTATTCTCCTTTGCATGATAGTAAGGAAGATTTAG 966 0.442 MASTFNRWEKDPFFTAAEQVQESADRMESAFRAWIHAKKDACSPWNSDEICRDVHTALGTAKWQLDEFEKAVTSSYNNSSTKDARNRHQDFISAIVDKITKVEHSLNESLHPGNKVPLPWVRLDEGERDELALFLSGMPEAEGKSVGRDHEDSQSTSGWGSTLEVEDKSPGHRRAASADAHVSSWKIAVSDELQQRNTPDGSSGAMHKVASLSAFVSSMESVSKLKWAKNGYKKLKAGNHHQESDNALLPSAQLNGGLNSCYERSKSYLDSCDECYDKQLYGWYGAIQRQLQRSQYQMQYSRPVQLTVWISILLCMIVRKI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3239 321 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Ahy17g3239 321 PANTHER EXPRESSED PROTEIN 1 317 - -
Ahy17g3239 321 Gene3D - 9 110 - -
Ahy17g3239 321 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Ahy17g3239 321 PANTHER OS05G0443700 PROTEIN 1 317 - -
Ahy17g3239 321 MobiDBLite consensus disorder prediction 141 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3239 Ahy-Chr17 134485626 134488415 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3239 17 134485626 134488415 Ahy17g3239 17 134485626 134488415 ECH
Ahy17g3239 17 134485626 134488415 Ahy8g0955 8 18374858 18377815 hybridization
Ahy16g3470 16 152060873 152062619 Ahy17g3239 17 134485626 134488415 PCT
Ahy17g3239 17 134485626 134488415 Ahy16g3470 16 152060873 152062619 PCT